Sesamum indicum (sesame): 105170796
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Entry
105170796 CDS
T04135
Name
(RefSeq) histone deacetylase 9 isoform X1
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
sind
Sesamum indicum (sesame)
Pathway
sind03082
ATP-dependent chromatin remodeling
sind03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105170796
03083 Polycomb repressive complex
105170796
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sind03036
]
105170796
Enzymes [BR:
sind01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
105170796
Chromosome and associated proteins [BR:
sind03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
105170796
HDAC complexes
Sin3A-HDAC complex
105170796
BRAF-HDAC complex
105170796
REST complex
105170796
SHIP complex
105170796
MiDAC complex
105170796
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
105170796
Heterochromatin formation proteins
Other heterochromatin formation proteins
105170796
Chromatin remodeling factors
NuRD complex
105170796
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
105170796
NCBI-ProteinID:
XP_011090013
UniProt:
A0A6I9U0S2
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All DBs
Position
LG9:6413045..6418706
Genome browser
AA seq
430 aa
AA seq
DB search
MRSKDKISYFYDGDVGNVYFGPNHPMKPHRLCMTHHLVLSYELHKKMEVYRPHKAYPVEL
AQFHSPDYVEFLQRITPNTQELFSNEMVKYNLGEDCPVFDNLFEFCQIYAGGTIDAARRL
NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE
EAFYFTDRVMTVSFHKYGDLFFPGTGDVKDVGEREGKFYAINVPLKDGIDDGSFLRLFKT
IILKVMECYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAACVKFVKQLNLPLLVTGGGGY
TKENVARCWTVETGALLGVELPNEIPENDYIKYFAPDYSLKCPSGHLENLNSKSYLNTIR
QQVCENLSSIQHAPGVQMHEVPPDFYIPDFDEDELNPDERVNRHIQDKHIQRDDEYYEGD
NDNDQTMDDS
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgcgctccaaggataaaatctcctatttctatgacggggatgtggggaacgtgtacttc
ggccccaaccacccgatgaagccgcatcggttgtgcatgacccaccatttggttctctct
tatgagctccacaagaagatggaagtttataggcctcacaaggcatatcctgtggagcta
gcacagtttcattccccggattatgtggagtttctgcagcgaattactcccaacacacaa
gagttgttctcgaatgagatggtcaaatataaccttggagaagattgtccagtctttgac
aatctctttgagttttgtcaaatttatgctggtggtacaatagatgctgcacggagattg
aataatcagctctgtgacattgccataaattgggctggtggattgcatcatgctaagaag
tgtgaggcatctggattttgttacatcaatgacctagttttgggcattttggagcttctg
aagtatcatgcacgtgtgctatatattgatatcgatgtgcatcatggtgatggggttgaa
gaagccttctatttcactgatagggtgatgactgttagttttcacaagtacggggacttg
ttctttcctggaacaggtgatgtcaaggacgttggagaaagagaaggcaaattttatgcc
ataaatgtccctcttaaggatggaattgatgatggcagcttcctacgtctcttcaagacg
atcattttgaaggttatggagtgctatgcacctggagctattgtgctccaatgtggagca
gattcacttgctggggacagattggggtgcttcaacctctccattgatgggcatgcagct
tgtgttaagtttgtgaagcaactgaacttgcctttgctggtgactggaggtggtggatat
actaaagagaatgttgctaggtgttggaccgtggagacaggagctcttttaggtgtggag
ctccctaatgagatcccagaaaacgattacatcaaatattttgctccagactattccttg
aaatgtccgagcggccacttggagaatttaaatagtaagtcataccttaacacaatcaga
cagcaagtatgtgaaaaccttagctccatccaacatgctcctggtgtacaaatgcatgag
gtacctccggatttctacattcctgattttgatgaagatgagctgaatcctgatgaacga
gtaaatcgacacatacaagacaagcacatccagcgcgatgatgaatattatgaaggcgat
aatgacaatgaccagaccatggatgattcatga
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integrated database retrieval system