Sesamum indicum (sesame): 105171897
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Entry
105171897 CDS
T04135
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase 2
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
sind
Sesamum indicum (sesame)
Pathway
sind03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
105171897
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sind01002
]
105171897
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sind04121
]
105171897
Enzymes [BR:
sind01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
105171897
Peptidases and inhibitors [BR:
sind01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
105171897
Ubiquitin system [BR:
sind04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
105171897
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
Ribosomal_L37ae
Motif
Other DBs
NCBI-GeneID:
105171897
NCBI-ProteinID:
XP_011091455
UniProt:
A0A6I9TW99
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All DBs
Position
LG10:4194726..4203765
Genome browser
AA seq
1130 aa
AA seq
DB search
MIETYVSTAAQVFAGNVNLEAAANWIVKHENEPDIDQMPLVHVSSETPEAPKTSIAQEEV
KQKEQELREHCEKIEEDKQTVKEREKAIMGKKVKKKTRSGQKEKQGPSTSPRTVSKQGTS
NAETPDDGVAGIKDRGLCSHLDRGINLEKLSAKLRSSESLICEDCRGSVVDRRAKKGKGK
HGKKGGTNSKPESKAIWICLECGHFSCGGVGLPTTPQSHAVRHAKQNHHPLVLHYENHQQ
LWCFPCXXXXXEDNKHKEVLNEVVKLLKGRPGEGSTVDVEDVWFGSGSVTTAIKSDYSAS
IGADGRAGYSIRGLVNLGNTCFFNSIMQNLLAITSLRDYFFKLDESVGSLTAALRKLFLE
TSGEAGLKSVINPRSLFGSLCTKAPQFRGYQQHDSHELLRCLLDGLSTEELSARKHAKSP
QASIADPTFVDTIFGGRLSSTVSCLECGHSSTIYEPFLDLSLPVPTKKPPARRAQPVTRG
KKPKMPLKKSGRNPSKNSREACSIPGQGVSNQSTGGNSLGEMQSIAPPAEQSVLALGDSA
LSDPTNPNTIALDMGFTAQDLSAIQNPQAVQNGEQSSPLDNFTWLDYLDPSPDSHDIAIT
SETDEIAAIQGFANEDILQNDASLSITMDSSIESTPANAVSATALDIAENLNSLEPGALA
QQQNAFSQFEDKQNVEEQLDERLSPDVSVTVGEYDTDIGHSSDNPVCSKDSSTSGRDNEN
PLQVQDSEVILLPYKEDYSSNVELMRAEIDVSPAVLADEQSSLDFDGFGDLFNEPEVSVQ
HKPSNHPVSEASDIAKNGVMGNSSESDPDEVDNADAPVSVESCLAFFMKPELLSKDEHAW
QCDNCSKVLREQRIRLRWKSQMPISEVMPNGYENGNPSGLLDVGKTCNKVISRTGDVEEY
VSDPSDGRSVPQNREIYVNGKCMLEKDLDPENEINVIDFQSEITEPQVVTPCHGQLESSS
SSNQNLNPCLGKCDSDNGFTESDILSAKCESEVGEQEEVNSENVKVKRDATKSILINKAP
SILTIHLKRFSQDARGRLSKLNGHVNFKETIDLKPYMDPRCTEKDTFIYRLVGVVEHTGS
MRGGHYIAYVRGTKNFGKCVWYHASDAYVREASLEEVLRSEAYVLFYEGT
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaaacatacgtcagtacagctgcccaagtcttcgcaggcaatgttaaccttgag
gctgctgcaaattggatagttaaacatgagaatgaaccagatattgaccaaatgccattg
gtacatgtcagttcggaaacacccgaggctccaaagacatctatcgcacaagaagaggtt
aagcagaaagaacaagaattaagggaacactgcgaaaagatagaggaggacaaacaaaca
gtaaaggaaagggagaaggcaataatggggaaaaaggtgaagaagaaaacgagaagtggt
cagaaagagaaacaggggccatctacatctcctagaactgtttctaaacaaggcacgagc
aatgctgaaacccctgatgatggagttgcaggtattaaagatagaggactatgttcccat
cttgatagaggaattaatttggagaaactgtctgccaaacttaggtcttcagaatctctt
atatgtgaagattgtcggggaagtgttgttgatagacgagcaaagaagggaaagggtaaa
catgggaaaaaaggggggacaaattcaaagccagagtcaaaagcaatttggatttgcctg
gaatgtgggcatttctcatgtggaggtgttggattaccaactactcctcagagccatgct
gttcggcatgcaaaacagaatcatcatccgttagtgctccattatgaaaaccatcaacaa
ctttggtgttttccttgcnnaannnnnnnnnnagaagacaacaaacacaaagaggtttta
aatgaggttgtgaaattgcttaaagggcgacctggtgaaggatccactgtagatgttgag
gatgtttggtttggaagtggtagtgtgactactgcaataaaatcagattactctgctagc
attggtgcagatggaagggctggctattccataagagggttagttaatttggggaatacc
tgtttctttaattcaataatgcaaaatctattagctataactagcttgcgtgattatttc
tttaaattagacgagtctgttggttctttaactgctgctctgagaaagcttttccttgaa
accagcggtgaagctggcttaaaaagtgtgattaatcctagatctttattcggtagtctt
tgtaccaaggcaccccagttcaggggatatcagcaacatgatagtcatgagttgctcaga
tgtttgcttgatggtttgtcaactgaagagttgagtgcaagaaagcatgccaaatctcct
caggcttcaattgcagatcccacatttgtggataccatttttggtggaaggctttctagt
actgttagttgtttagaatgtgggcactcgtcaacaatttatgaaccgtttttggatctc
tcattgccagttcctaccaagaagcctccagcaagacgggcccaacctgtcactcgaggc
aagaaaccaaaaatgcctctaaagaaaagtggaagaaatccctccaaaaatagcagagaa
gcatgtagtataccaggacaaggtgtttctaaccaatcaactggtggaaactctttaggt
gaaatgcagtctatagcaccaccagcagagcagtcggtgcttgctttgggtgattctgca
ttatcagatcccactaatccaaacactatagctctggatatgggttttactgctcaagac
ctttcagctattcagaacccccaagcagttcagaatggagagcagtcaagccctttagat
aattttacatggttggattaccttgatccaagtccagactcgcatgatattgctataact
tcggaaactgatgaaattgcagcaatccagggttttgcaaatgaagatattctccaaaac
gatgcctcattgtctatcactatggactctagtattgagagtactccagcaaatgcagtt
tcggcaaccgccttggatattgctgaaaatttaaattcccttgaaccaggtgcattagca
caacaacaaaatgctttttcccaatttgaggacaagcaaaatgttgaagaacaactggat
gagagactctcccctgatgtttcagttaccgttggtgagtatgacactgatataggtcat
agctctgataatccagtttgctccaaagattcaagtacttcagggagggataatgaaaat
cctttacaggttcaggactctgaggttattttgcttccctataaagaggactattcatct
aatgttgagttaatgagagcagaaattgatgtctcgccagcagtacttgctgatgaacaa
agttccttagattttgatggatttggagatttgtttaatgaaccagaggtttcagtgcag
cataagccttcaaaccatcctgtttctgaggcaagcgatatcgctaaaaatggagttatg
gggaatagcagtgagtctgatccagatgaggttgataatgcggatgctccggtgtctgtt
gagagttgtttggctttcttcatgaagccagagcttctttccaaggatgaacatgcttgg
caatgtgataattgttcaaaagttttgcgagagcaaagaattagattgagatggaaatct
caaatgcctatatcagaagtaatgccaaatggttatgagaatggaaatccaagtggtcta
ctggatgttggaaagacttgcaacaaagtgataagtaggactggagatgtggaagaatac
gttagcgacccttctgatggcaggtcagtgccacagaacagggagatttatgtaaatggg
aaatgcatgcttgagaaggatctggatccggagaatgagataaatgtgattgatttccag
tcagaaatcacagaacctcaggtggtaactccatgtcatggtcagttagaaagttcaagt
tccagtaatcaaaatcttaatccttgccttgggaaatgcgattctgataatggatttaca
gaaagtgatatactgtcagccaaatgtgaatcagaagtaggcgagcaagaggaggtgaac
tcggagaatgtgaaagtgaagagggatgcgactaagagcatactgatcaacaaggctcct
tctatcttaacaatccatctaaagaggttcagtcaagatgctcgagggcgattgagtaaa
ttgaatggccatgtgaactttaaagagacaattgatctgaaaccgtacatggatcccagg
tgcactgagaaggatacgttcatataccgtctagtcggagtggtggagcatacaggatcc
atgaggggtgggcattatattgcatacgtgagaggtactaaaaactttgggaaatgcgtt
tggtatcatgccagtgacgcatatgtccgcgaggcttctttagaggaagtcctgagaagt
gaagcctatgttttgttctacgaagggacttga
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