Streptomyces inhibens: KI385_17040
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Entry
KI385_17040 CDS
T08140
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
sine
Streptomyces inhibens
Pathway
sine03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sine00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KI385_17040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sine03400
]
KI385_17040
Enzymes [BR:
sine01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
KI385_17040
DNA repair and recombination proteins [BR:
sine03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KI385_17040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_4
UvrD_C_2
SH3_13
Viral_helicase1
HHH_5
AAA_11
AAA_22
Helicase_RecD
PIF1
PhoH
AAA_16
nSTAND3
DEAD
HHH_2
UvrD-helicase
AAA
HTH_IclR
UvrD_C
TrwB_AAD_bind
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
UKY50359
LinkDB
All DBs
Position
complement(3712649..3714859)
Genome browser
AA seq
736 aa
AA seq
DB search
MVNAAVVEGVLERITYANEESGYTVARVDTGRGSGDLLTVVGALLGAQPGESLRMEGRWG
SHPQYGKQFTVENYTTLLPATIQGIRRYLGSGLIKGIGPRIADRIVEHFGTDTLDVIESE
PERLVEVPGLGPKRTKMIGAAWEEQKAIKEVMVFLQGVGVSTSIAVRIYKKYGDASISVV
RNEPYRLAADVWGIGFLTADRIAQSVGIPHDSPDRVKAGLQYALSQSTDQGHCFLPEEQL
IADAVKLLQVDTGLVIDCLGELAADPEGVVREKVPGGADEAPVTAVYLVPFHRAEISLAG
RLTRLLRTDEDRMPAFRDVDWDKALAWLARRTGAELAPEQQEAVRLALTQKVAVLTGGPG
CGKSFTVRSVVELARAKKAKVVLAAPTGRAAKRLSELTGAEASTVHRLLELKPGGDAAYD
ADRPLDADLVVVDEASMLDLLLANKLVKAVPPGAHLLLVGDVDQLPSVGAGEVLRDMLSE
GGPVPAVRLTRIFRQAQQSGVVTNAHRINSGVPPLTTGLADFFLFVEEDNEEAGRLTVDV
AARRIPAKFGLDPRRDVQVLTPMHRGPAGAGALNGLLQQAVTPARPDLPERRFGGRVFRV
GDKVTQIRNNYEKGRNGVFNGTVGVVTALDSDEQRLTVRTDEGEEVPYDFDELDELAHAY
AVTIHRSQGSEYPAVVIPVTTSAWMMLQRNLLYTAVTRAKRLVVLVGSRKALGQAVRTVS
AGRRCTALAHRLAGAM
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atggtcaacgcagccgtcgtggaaggggtcctggagcggatcacctacgccaatgaggag
agcggctatacggtcgcgcgggttgatacgggccgcggttcgggtgatctgctgaccgtt
gtgggtgcgttgctcggggcgcagccgggggaatcgctgcgtatggaggggcgctggggc
tcccatccgcagtacggcaagcagttcacggtcgagaactacaccaccctcctgcccgcc
acgatccagggcatccgccgctatctgggctccggcctgatcaagggcatcggtccgcgg
atcgcggaccgcatcgtcgagcacttcggtacggacaccctcgacgtcatcgagagcgag
cccgagcgcctcgtcgaggtgccgggtctgggccccaagcggacgaagatgatcggggcg
gcctgggaggagcagaaggccatcaaggaggtcatggtcttcctccagggcgtcggtgtg
tccacctccatcgcggtgcggatctacaagaagtacggcgatgcctcgatctccgtggtc
cgtaacgagccctatcggctggccgcggatgtgtggggcatcggctttctgaccgccgac
cgcatcgcccagtccgtcggcatcccgcacgacagcccggaccgggtcaaggcgggcctg
cagtacgcgctgtcgcagtccaccgaccagggccactgcttcctccccgaggagcaactg
atcgcggacgcggtgaagttgctacaggtggacaccggactggtcatcgactgtctgggc
gagctggccgcggacccggagggggtggtccgggagaaggtgccgggcggcgcggacgag
gcgccggtcaccgccgtctatctggtgccgttccatcgcgccgagatctcgctcgccggc
cggctgacccggctgctgcgtacggacgaggaccggatgccggcgttccgggacgtcgac
tgggacaaggcgctggcgtggctggcgcggcgtacgggtgccgagctggcgcccgagcag
caggaggcggtacggctggcgctgacgcagaaggtcgcggtgctcaccggcggcccgggc
tgcggcaagtccttcacggtccggtcggtggtcgagctggcccgcgccaagaaggccaag
gtggtgctggcggctcccacgggccgggcggccaagcggctctcggagctgaccggggcg
gaggcctccacggtccaccgcctcctggagctgaagccgggcggggacgccgcgtacgac
gccgaccggccgctggacgccgatctggtggtggtcgacgaggcctcgatgctggatctg
ctgctggccaacaagctcgtcaaggcggtgccgccgggcgcccatctgctgctggtcggg
gatgtggaccagctgccgtcggtgggggccggtgaggtcctgcgggacatgctctccgag
ggagggcccgttcccgccgtccggctgacccggatcttccggcaggcccagcagtccggc
gtggtcaccaacgcccaccgcatcaactccggcgtcccgccgctgacgaccgggctggcg
gatttctttctgttcgtcgaggaggacaacgaggaggccgggcggctgacggtggatgtg
gcggcgcgccggatcccggcgaagttcggcctcgacccgcgccgcgacgttcaggtactg
accccgatgcaccgcggtccggccggtgcgggcgccctgaacggtctgctccagcaggcc
gtcacccccgcccgccccgatctgcccgagcgccgcttcggcggccgggtcttccgggtc
ggcgacaaagtcacccagatccggaacaactacgaaaagggccgcaacggcgtcttcaac
ggcacggtcggtgtcgtcaccgcgctggactccgacgagcagcggctgacggtgcggacc
gacgagggcgaggaggttccgtacgacttcgacgaactcgacgaactcgcgcacgcctat
gccgtgacgatccatcgctcgcagggtagtgagtatccagcggtggtgattccggtcacc
accagtgcctggatgatgctgcagcgcaatttgctgtataccgccgtgacccgggcaaag
cgcttggtggtgctggtcggctcccggaaggccctggggcaggccgtccgcaccgtatcc
gccggtcggcggtgtacggcgctcgctcaccggctcgccggggccatgtga
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