Sinomicrobium kalidii: LS482_00455
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Entry
LS482_00455 CDS
T07760
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
sinh
Sinomicrobium kalidii
Pathway
sinh02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sinh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LS482_00455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sinh03021
]
LS482_00455
Transcription machinery [BR:
sinh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LS482_00455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
Sigma70_r4
GerE
HTH_40
HTH_30
HTH_28
HTH_23
Motif
Other DBs
NCBI-ProteinID:
UGU16354
LinkDB
All DBs
Position
complement(112581..113177)
Genome browser
AA seq
198 aa
AA seq
DB search
MNPTNSNNLIQLIKRGDEKAFETLYRLYANNLFVIARSYLKDDFLAEEVVQGIFISLWDR
RKELHIRGNTGGYLFKMVKNRCLDILRKPRKLISMEDETVLLENKLNFKALQDKEAAFLL
EEELEKRIEEAVALLPKTCKKVFLKTKVDGLNYKETAEELRISVKTVESHMTKALKHMRL
HLREFLSCFSLFGGIPFL
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
ttgaatccaactaactcaaataatttaatacagctcataaaacggggggatgaaaaagcc
tttgaaaccctgtaccgtttgtatgccaataatctgtttgtcatagcaaggtcctacctg
aaagatgattttctggccgaagaagtggtgcagggcatttttatttcgttatgggaccgg
agaaaagagcttcacatccggggaaatacgggagggtatctgtttaaaatggtgaaaaac
cgttgcctggatattctcaggaaaccgagaaagctgatttctatggaagatgaaacagta
ctccttgaaaataagctaaatttcaaggcattacaggataaggaagccgctttcctgctg
gaagaagaactggaaaaacgtatagaagaggctgtggcgctgctgcctaaaacctgtaaa
aaggtgttcctgaaaaccaaagtggacggacttaactacaaagaaaccgccgaggaactc
cgtatctccgtaaaaaccgtagaaagtcatatgacgaaggcattaaaacatatgcgtttg
catttacgtgagtttttgtcgtgcttttccctgttcggaggaattcctttcctttaa
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