Sinomicrobium kalidii: LS482_04925
Help
Entry
LS482_04925 CDS
T07760
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
sinh
Sinomicrobium kalidii
Pathway
sinh02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sinh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LS482_04925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sinh03021
]
LS482_04925
Transcription machinery [BR:
sinh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LS482_04925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
GerE
Sigma70_ECF
HTH_40
Sigma70_r4
HTH_28
HTH_23
HTH_29
HTH_11
HTH_17
Casc1_N
Motif
Other DBs
NCBI-ProteinID:
UGU17214
LinkDB
All DBs
Position
1227293..1227853
Genome browser
AA seq
186 aa
AA seq
DB search
MKRIRLHTEKTEKDHSDSTSFDNLFRLYYDKLLHIAKGYVVYREDAEEIVQNTFLKLWEN
RNNIGSIRNINNYLYTLTRNGCLDLLKHREVRLDYSEKKKSIQQQFLKDEAASLLLENEL
QKKIDESIDLLPDKCKEVFVKSRIEGMKRKEIAALLNLSPRTVDNHIANALKYMRLHLKD
FISFFF
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
ttgaaacggatccggctacatactgaaaagacagaaaaagaccatagcgatagtacttct
ttcgacaatttattcaggctttattatgataaattattacacatagccaaagggtatgtt
gtttatcgggaagatgccgaagaaattgttcagaatacttttttaaaactctgggaaaac
aggaataacatcggttccatcaggaatattaacaactatctctatacacttaccaggaac
ggttgcctggatcttttaaagcaccgtgaagtacggctcgattattcggagaaaaaaaaa
tccatccaacagcagttcctgaaagatgaagcggcatcactcctactggaaaacgaatta
cagaaaaagattgatgaaagtatcgacctgcttccggacaaatgcaaagaagtgtttgta
aaaagcaggatagagggcatgaagcgaaaggagatcgctgctcttttaaatttatctcca
agaactgttgataatcatatagccaatgctttaaagtatatgaggcttcatttaaaggat
ttcatttctttctttttttaa
DBGET
integrated database retrieval system
