Sinomicrobium kalidii: LS482_10000
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Entry
LS482_10000 CDS
T07760
Name
(GenBank) T9SS type A sorting domain-containing protein
Organism
sinh
Sinomicrobium kalidii
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_3
CBM_3
Por_Secre_tail
fn3
Toxin_R_bind_N
Laminin_G_2
Laminin_G_1
TcfC
Pectate_lyase_4
Pur_ac_phosph_N
Motif
Other DBs
NCBI-ProteinID:
UGU18199
LinkDB
All DBs
Position
2513437..2518146
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AA seq
1569 aa
AA seq
DB search
MITTEIFSNRRTNILLWLVLLTLWSIPDIVFSQTPAFPEAEGFGRYATGGRFGGVYIVTN
LNDSGPGSFRDAVSQPNRIVVFEVGGVIRLKSRVVVSENITVAGQTAPGDGIVIYGDGFS
YTQASNSIIRYLRMRMGRIGTSGADAVGITDDAKHIIFDHVSASWGRDETFSITRYADSI
TIQNCIIAQGLETHSAGGLIEPSGKVSLYRNLYIDNNTRNPKVKGINQFVNNVVYNWGRG
GGYIMGGSAGDSFVNIINNYLVKGPSTTIEPFTRGTETFIPYVEGNYYDDNLNGVLDGYE
VPLSAYEGITTFRDTPYDYPMPAQVFTAEETFGHVMENAGANYPRRDPVDDFLITELASI
GVSGALISDEMDLPTQGPGEVFGAPALQDTDRDGIPDTWENANGLNPENASDAMQINAEG
YANIEVYINNLAETPAPDFLRPPSGVASDSVSTTGIGLTWKNNDSRTTGIVIERSDDSTN
YQVLDTLGGDAMTYLDNELEPGTMYRYRLRAYNAAFSSVYTTPLDVETTPVPTVPDAPVS
PAPGDQSIYADTTGLRLSWTGSENTDAYTVYLSSHPDSLQQVAALTDPFYDADTLQSGTT
YYWRADAANELGTTTGSVWSFTTLPYFPKGVAGAWLMDEDGGASVVDSSSYANHAEINGV
PGYDRVEGKVGRAVDLNTGETSSHIRVPHRDHLYMGKQSFTISMWLKSSSQDNQSYLVHK
GTFNRDDASGATGRWYGIEVKDGDIRFAVDDDITKTQLSVDAGPFFTGEWIHLVAVRDRE
TDVLRLYRNGVLINEATDRTEENIGQQAPVIIANSSNLDTPFRGQLDEFRIFNYGLSEQE
ILELYQTDPTPLKPLAPHPSEDAVLEGFEENVEATWTGGVNTTSYKIYIGTDEENMSLAG
ETGVDSPAFSFQNLQRDTDYYWRVDAIGPEGTTTGATWTFRTTAPKGLVGYWKMDETSGL
RVTDAAYYAHEGTVTGFPEAVWEAGMSGNAFRFSEPSDTAAIKIPHADHLVFENTSFTIS
LWVKIPEDTYAYGTDCYLMHKGTFESGTGKWYGIQLRDGRLTFAIDDGRTKTDISASVTN
SASHPLFTDEWKNIVAVRDTKTDQIRLYMDGVKIAEKTDATGTIGKAVPLLLGNSPENKP
YRDLMDEVKLYNYALTQEEIRARADGHPVKITYRDGDNGNSGDNEIRPFFRIVNEDDIDI
PYEELSVRYWFTPEDYAGINAWIDYAGPGNGNISAVYHPLETPHNGAFGYVEYHFENIGG
LKAGEETGVIESRLAKENWTDFVETGDYSYQQGETYAENNRITLYRNGQLIWGKEPGKQT
PVTDLKVYSKNRNGNTNTNTIHPYIKIRNEGNIPLDYSDLELRYWFTAEGNSPLDYWIDY
AELGNGNMEATFVKPDTILAGADTYFKLNFNPSAGQLYPLSGSGEIQYRIAKADWSVFDE
SDDHSFLPKAPFAENEHITLYYKGELIYGTEPGSNNNSETSLKTTADNNQLTQEVYVYPN
PARDHVRVQLNDINDAGNIRLFNRSGRLLHNRAVKQNTFLIDLQRFPPGIYILEIENGKE
TTTHKIIKK
NT seq
4710 nt
NT seq
+upstream
nt +downstream
nt
atgattactactgaaattttttcgaacagaaggacaaatattttattatggcttgtcctg
ctcacgttatggagtattccggatattgttttttcacagacaccggcttttccggaagca
gaaggtttcggccgttatgcaaccgggggacgctttggcggggtatatattgtaaccaac
ctcaatgactccggacccggatcgttccgggacgcggtgagtcaacccaaccggatcgtg
gtttttgaagtgggcggggtgatacgtctgaaaagccgcgtagttgtttccgaaaacatc
acggttgcagggcaaaccgcaccgggtgacggcattgttatctatggcgacggattttca
tatacccaggccagtaattccattatccgttatctccgcatgcgcatgggcaggattggg
accagcggggccgatgcggtcgggattaccgatgatgcgaaacacattattttcgaccat
gtttcagcgtcctggggacgcgatgaaaccttttccattacccgttatgccgatagtatc
accatacagaactgtattatagcccagggcctcgaaacccactctgcaggcggattgatc
gaaccctccgggaaggtaagcctttacaggaacctctatattgataataatacccgtaat
cccaaagtgaaagggatcaaccagtttgtaaataatgtggtctataactggggaagagga
ggcggatacattatgggaggctctgccggggattcctttgtgaatattatcaacaattat
ttggtcaaaggacccagcaccaccatagaaccgtttacccggggtacggaaacttttatc
ccttatgtggaagggaactattatgacgataaccttaacggtgtcctcgacggttatgaa
gttccgctttcggcatatgaggggatcactacttttcgcgatacaccttatgactatccc
atgccggcacaggtgtttacggcagaagaaactttcggtcacgtcatggaaaatgccggg
gccaactacccccgccgtgatccggtagatgatttcctgatcactgaactggcctctatc
ggggtctcgggagctttgatatccgatgaaatggacttaccgacacagggaccgggagaa
gttttcggtgcgccggctctgcaggataccgatcgcgacggaattcccgatacctgggag
aatgctaacggactcaatcccgaaaatgcttcggatgccatgcagatcaatgcagaaggt
tatgcgaatatcgaggtgtatatcaacaacctggcagaaaccccggctcctgatttttta
cgcccgccttccggggtggcatccgattcggtttctactaccgggatcgggctcacctgg
aagaacaatgacagcagaaccaccgggattgtcatcgaacgatcggacgacagtacaaac
tatcaggtactggataccctgggcggagatgccatgacttatctggacaacgaactggaa
ccgggcacaatgtaccgctatcgccttcgtgcctataatgctgcgttttcttcggtttat
accacacctttggatgtggagaccaccccggtacctacggtgccggacgctcccgtttct
cctgcgcctggagatcagtccatatatgcggataccacggggctccggctaagctggaca
ggcagcgaaaacaccgatgcatatacggtatacctgtcttcgcatccggatagcctgcaa
caggtggctgcgcttaccgatccgttttacgatgcggataccctgcaatccggcactacc
tattactggcgtgcagatgccgccaacgaactgggaacgactacgggcagtgtgtggtct
tttactacccttccctatttcccgaaaggtgttgcaggtgcctggcttatggatgaggat
ggtggtgcttcggtcgtagatagttcttcctatgcaaaccatgcggagatcaatggtgtt
ccgggttacgaccgtgtcgaaggtaaggtgggcagggcagtggatttgaatacgggagaa
acatcgtcgcacatccgggtaccgcaccgggatcatctgtatatgggaaaacagtcgttt
accatatccatgtggttaaaatcctcttcacaggacaatcagtcctacctcgttcacaag
ggtacttttaacagggatgatgcttcgggcgccacggggcgctggtatggtattgaggtg
aaggacggggatatccgctttgccgtggatgatgacattaccaagacacagctatctgtc
gatgccggtcccttttttaccggtgaatggatacacctggtagcggtaagggacagggaa
accgatgtgctccggctgtaccgcaatggtgttttgataaacgaagctaccgacaggacg
gaggaaaatatagggcagcaggccccggttattattgcgaacagcagtaacctggacact
ccgttccgcgggcagctcgatgaattccggatttttaattacggtttaagtgaacaggaa
atactggaattgtaccagacagacccgacaccgctcaaaccgttggccccccatccttcc
gaagatgctgtgctggaagggttcgaagaaaatgttgaagctacctggacagggggtgta
aacacaacgtcttataaaatttatatcgggaccgacgaggaaaatatgtcacttgcaggg
gaaaccggtgtggacagtcccgctttttcctttcagaacctgcaaagggataccgattat
tactggcgggtagatgccattggccctgaagggacaaccaccggagctacctggacattc
cgcactacggccccgaaagggctggtaggatactggaagatggatgaaacatccggatta
cgggtgacagatgctgcctattatgcccacgagggaacggtaaccggttttccggaagcg
gtctgggaagcggggatgtcgggcaatgcctttcggtttagtgaaccttccgatacggcg
gccataaaaattccccatgccgatcacctggtgtttgaaaatacttcgttcacgatctcc
ctctgggtaaaaattccggaagacacctatgcctacggaacagattgctatttgatgcat
aaaggcacatttgagtccggtaccgggaaatggtatggcattcagttgcgcgatggcagg
ttgacctttgccattgacgacggccggacaaaaaccgatatttcagcttccgtaaccaac
agtgcttcccaccccctgtttaccgacgagtggaagaatatcgttgccgtaagggatacc
aaaacggaccagatacgcttgtatatggacggggtgaaaattgccgaaaaaaccgatgct
acagggacaataggaaaggcagttcctctgttactgggcaattcacccgaaaataaaccc
tatcgcgaccttatggatgaggtaaaactctacaattatgccctgacacaggaagagatc
cgggcccgggcagacgggcatcccgttaaaataacttatcgcgacggggataacgggaat
tccggggataatgaaataaggccattcttccggattgtcaatgaggatgatattgacatt
ccctatgaagaactctctgtccgttattggttcactcccgaagattatgccgggataaac
gcctggatcgattatgccggaccgggtaacgggaatatttccgcagtataccatcccctc
gaaacaccacataacggggctttcggttatgtggagtaccattttgaaaacatagggggg
ctcaaagccggtgaagagacaggcgtcatagaatcgcggctggccaaggaaaactggacg
gattttgtagaaaccggggattattcgtatcagcagggagaaacctatgcggaaaacaac
cggatcaccctgtaccgtaatgggcaactaatttggggaaaagaacccgggaagcaaacc
cctgttaccgatctgaaggtgtattccaaaaaccggaacgggaataccaatacgaatacc
atacatccttatataaaaatacgtaatgaaggaaatatccccctggattatagtgacctc
gaactgcgttactggtttacggccgaaggaaattcaccccttgattattggatagattat
gcagaactcggcaacggcaatatggaagctacgttcgttaaaccggatacgatattagct
ggggctgatacttattttaaactgaattttaatccttcggcagggcaattgtatcccctg
agcggttccggggaaatacagtatcgtattgccaaggcagactggagtgtttttgacgaa
agcgatgaccattccttcctgcctaaagcaccttttgccgaaaatgaacacattacgctg
tattacaagggagaactgatttacggtaccgaacccggaagtaataacaattccgaaaca
tcgttgaaaacaacagcagacaataaccagctaacgcaggaggtttatgtttaccccaat
ccggcccgggatcacgtacgcgtacaattaaatgatattaatgacgccggaaacataagg
ttgttcaacaggtccggacggttactgcataaccgggccgtaaaacaaaatacattcttg
atagacctgcaacgcttccctcccggaatttatatcctcgagatagaaaacgggaaggaa
acaacaacacataaaataattaaaaaataa
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