Sinomicrobium kalidii: LS482_11930
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Entry
LS482_11930 CDS
T07760
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K02481
two-component system, NtrC family, response regulator
Organism
sinh
Sinomicrobium kalidii
Brite
KEGG Orthology (KO) [BR:
sinh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
sinh02022
]
LS482_11930
Two-component system [BR:
sinh02022
]
NtrC family
Unclassified
LS482_11930
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA_2
AAA
AAA_3
AAA_16
Mg_chelatase
bpMoxR
TIP49
nSTAND3
Parvo_NS1
Motif
Other DBs
NCBI-ProteinID:
UGU14414
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Position
2985884..2987215
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AA seq
443 aa
AA seq
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MSYRRENILIVDDDIHILELVQRHLQSMNYHTYKAVSVKEAVSILKDAVINLLVTDLKMP
GVDGFQLIRYTEEHYPDMPVLVVTGYISTKNALNIGKSGVVDYLIKPFTKDELRAAVTKS
LESSGKSTEREKRPATINTGNAAYGELIGKSEAFERVRDIIDRVKDNRATVLIQGESGTG
KELIARAIHYSGRFSREPFVAVNCGAIPESLLESELFGYEKGAFTGASENRMGFFQAANK
GTIFLDEIGNASPQVQNGLLRVLQEKEVTGVGARKPQKIELRVIAATNSDLRELVRHKKF
REDLYYRLTVVEVNVPPLRERKADIPLLAEKYVRKYGVEYKDRLLSLVPEAMDVLLRYHW
PGNIRELENVIQRAVIMCDGQIELRDLPDTLKFKIDFPEDAFVSLAEMEKQYIHKVLRAV
DNNKTRAAEILGIDRKTLRSKLS
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcgccgggaaaatatcctgatcgtagatgatgatattcatattctggaactg
gtacaacgtcacctgcaatccatgaactatcatacctataaggccgtttcggtaaaagaa
gcggtttccattcttaaggacgccgttataaacctgctggtcaccgacctgaaaatgccg
ggagtggatggttttcagcttattcggtatactgaagagcactatccggatatgcctgta
ctggtggttaccgggtatatttccacgaaaaatgccctcaatatcggaaagtcaggagtg
gtggattatctcattaaaccttttaccaaggacgaactccgggctgcagtaacgaagtct
ctcgaaagttccggcaaaagtacggagagggaaaaacggcctgcaacgataaatacggga
aatgccgcctatggcgaactgatcggaaaatcggaagcgtttgagcgagtcagggatatc
attgaccgggttaaggacaacagggcaaccgtactcatccagggagaaagtggaacggga
aaggaattgatagccagggccattcattacagcggcaggttttccagggagccttttgta
gctgtgaactgcggagctatcccggaaagcctgctggaatcggaactctttggatatgaa
aaaggggcttttaccggcgcttccgaaaaccgcatgggtttttttcaggccgcaaacaag
gggactatttttctggacgaaataggcaatgcctccccgcaggtgcaaaacggattgctc
cgggtgttacaggaaaaggaggtaaccggggtgggagcgaggaaaccacagaaaatagaa
ctccgggtcattgccgctaccaacagcgatcttcgggaactcgtccgccataaaaagttc
cgggaagatctctattacaggctcaccgtagtagaggtcaatgtgcctccgcttcgtgag
agaaaagcggatattcccctgttggcggaaaaatatgtgaggaaatacggtgtggagtat
aaagaccgcctgttatccctggtacccgaggcgatggatgttttgctccggtaccactgg
cccgggaatatccgtgaactggaaaatgttatccaaagggcagtgatcatgtgtgacgga
cagattgagctgagggacctgcctgatactcttaaatttaaaatagatttcccggaagat
gcctttgtctcgttggccgaaatggaaaaacaatatatccacaaagtattgagggccgta
gacaataataagaccagggcagcggaaattttgggtatagaccggaaaacacttcgcagc
aagctgtcatag
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