Ruegeria sp. TM1040: TM1040_0686
Help
Entry
TM1040_0686 CDS
T00359
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
sit
Ruegeria sp. TM1040
Pathway
sit00470
D-Amino acid metabolism
sit00550
Peptidoglycan biosynthesis
sit01100
Metabolic pathways
sit01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
sit00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
TM1040_0686
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
TM1040_0686
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
TM1040_0686
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sit01011
]
TM1040_0686
Enzymes [BR:
sit01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
TM1040_0686
Peptidoglycan biosynthesis and degradation proteins [BR:
sit01011
]
Precursor biosynthesis
Amino acid ligase
TM1040_0686
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_4
LZ_Tnp_IS481
Motif
Other DBs
NCBI-ProteinID:
ABF63419
RoseoBase:
TM1040_0686
UniProt:
Q1GIU7
LinkDB
All DBs
Position
734517..735437
Genome browser
AA seq
306 aa
AA seq
DB search
MGGASGTLPKVAMLMGGPSAEREVSLSTGRECARALRGQGYEVVEVDAGPDLVAQLNDIK
PDVAFNALHGRWGEDGCVQGLLEWLRIPYTHSGVLASALAMDKERSKAAYRTAGLPVVDS
VIAAKADVMARHVIAPPYVVKPNNEGSSVGIYIVHEATNSPPQLSEEMPAQVMVEAYAPG
REMTVTVMGDRALCVTDILTDGWYDYEAKYATGGSRHVLPAEIPDEIADLCHDYALRAHQ
VLGCRGISRTDFRWDEARGADGLVLLETNTQPGMTPTSLSPEQAEHVGLTFGQLCAWLVE
DASCER
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
gtgggtggagcgagcggaacactcccgaaggttgcgatgttgatgggtggcccctcggcc
gagcgcgaggtgtctttgtcgacggggcgcgaatgcgcccgcgcactcagaggacagggc
tacgaggtggtcgaggtcgatgcaggccccgaccttgtagcgcaactcaatgacatcaaa
ccggatgtggctttcaacgctctgcatgggcgttggggagaagacgggtgtgtgcagggg
cttcttgagtggctgcgcatcccctacacccattccggcgtgctggcctctgcactggcg
atggacaaggagcgctccaaggcggcctatcgtaccgcaggcctgccggtggtcgacagt
gtgatcgccgccaaagcagacgtgatggcccgccatgtgatcgcgccgccctatgtggtg
aagcctaataatgagggttcgtcggttggcatttacatcgttcacgaggccaccaacagc
ccgccgcagctctctgaagagatgcctgcacaggtgatggtcgaggcctatgcgcctggt
cgcgagatgacagtgaccgtgatgggggatcgcgcgctctgtgtgaccgacatcctcacc
gatggctggtacgactatgaggccaaatatgccacgggtggctcgcgccatgtattgcct
gccgagatcccggacgaaatcgccgatctatgccatgattacgccctgcgcgcccatcag
gtgcttgggtgtcgcgggatttcgcgtacggattttcgctgggatgaggcgcgcggcgct
gatgggctggtgctgcttgaaaccaacacgcaaccggggatgacgccgacctcgttatcg
cctgaacaggccgagcatgttggtctcacattcgggcaactgtgcgcctggttggtggag
gacgcgtcatgcgagcgctga
DBGET
integrated database retrieval system
