Setaria italica (foxtail millet): 101753541
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Entry
101753541 CDS
T02818
Name
(RefSeq) SWI/SNF complex subunit SWI3B
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101753541
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sita03021
]
101753541
03036 Chromosome and associated proteins [BR:
sita03036
]
101753541
Transcription machinery [BR:
sita03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
101753541
Chromosome and associated proteins [BR:
sita03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
101753541
PBAF complex
101753541
GBAF(ncBAF) complex
101753541
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
SWIRM-assoc_1
CAF-1_p150
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
101753541
NCBI-ProteinID:
XP_004951592
UniProt:
K3YRW2
LinkDB
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Position
I:complement(5001010..5005036)
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AA seq
497 aa
AA seq
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MATTTATVTAPAPAPAANANFVPTPTAPHPRPAAPPASRAPSTLGPVKSEAPPAPSSTTS
AAAAASGPEDPSYIITVPSYSAWFSFDSIHDTERRLLPEFFEGEAAAASGCRGPGAYKYY
RDTLIRRFRARPGRRLTLTEARRGLVGDVGSVRRVFDFLEEWGLINYGALPSGSKQAKEK
REEAAPQPSLPSGATAPRKLCTGCRSVCGLAYYACDKADISLCARCFVCNNYRPGLTAAN
FKRIEITEDAKSDWTDKETLHLLEAVLHYGEDWKKVSEYVGSRSEKDCIARFIQLPFGEQ
FMGPKEDRMGFENDGDITDEPGAHVSKRLRLTPLADASNPIMGQVAFLSAIVGSDAASAA
AQAAISAQSHVDLNDGEIDSSINSAMEEESSHTNGLSVNDLLKEAATNARAQLEKERSNI
EQSLSDIVDVQMKEIQDKICRFEHKEMLMEKERQQLRCLRDLLFADQLTVMQHHRRPQAV
ATESKLDEKPKPVVNIS
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggctacaacgacggcgacggtgacggcgccggcgccggcgccggcggccaacgccaac
ttcgtgccgacaccaacggctccgcatccacgccccgcagcaccacccgcttcccgggcc
ccctccaccttgggtcccgtcaagtcggaggcccctccagccccctcgtccactacctcc
gccgccgccgccgcatccggaccggaggatccatcctacatcatcaccgtcccaagttat
tcagcgtggttctcgttcgactccatccacgacactgagcgccgcctcctgccggagttc
ttcgagggggaggccgcggcggcgtccgggtgccggggcccgggcgcgtacaagtactac
cgcgacaccctgatacggaggttccgggcgcggccgggtcgacggctcacgcttacggag
gccaggcggggacttgttggcgatgttggctccgtccgccgcgtcttcgacttccttgag
gaatgggggctcatcaactatggtgctttgccgtcgggctcaaagcaggcgaaagagaag
agggaagaggctgcgccacagccgtcattgccttctggggcaacagcacccaggaagctt
tgcactggttgccgctctgtgtgtgggcttgcttactacgcctgcgataaggcggatata
agtctctgtgctagatgctttgtatgtaataactaccggccgggtctgactgctgcaaac
ttcaagagaatcgaaattactgaagatgcaaaatcagattggacagacaaagaaactctt
cacttgcttgaggctgtcttacattatggcgaggactggaaaaaggtgtctgagtatgtt
ggtagtcgatcagaaaaagactgcattgcaagattcatccaattaccttttggagaacag
ttcatgggacctaaggaggatagaatggggtttgagaatgatggcgacattactgatgag
cctggagcacatgtctcaaaacgactacgtctcactccactggcagacgcaagcaatcca
attatgggtcaggttgcattcttatcagccattgtgggttcagatgcggcctcagctgca
gctcaagcagctatttctgcacaatcccatgttgatctaaatgacggtgagattgattct
tcaataaatagcgccatggaagaagaatcgtctcacacaaatgggctttcagttaacgat
ttgctcaaagaggctgccactaatgcacgggcacaacttgagaaggaacggagcaacata
gagcaatctttatctgatatagtggatgtccagatgaaggaaatccaagataaaatatgc
cgttttgaacacaaggagatgctgatggagaaagagcggcagcagctccgctgcctgagg
gatttgcttttcgcagatcaactgacggtcatgcaacatcatcgccggccccaagctgta
gccacagagagcaaacttgatgagaagccaaaacccgttgttaacataagttga
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