KEGG   Setaria italica (foxtail millet): 101754656
Entry
101754656         CDS       T02818                                 
Name
(RefSeq) histone deacetylase 9 isoform X1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
sita  Setaria italica (foxtail millet)
Pathway
sita03082  ATP-dependent chromatin remodeling
sita03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:sita00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    101754656
   03083 Polycomb repressive complex
    101754656
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:sita03036]
    101754656
Enzymes [BR:sita01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     101754656
Chromosome and associated proteins [BR:sita03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     101754656
   HDAC complexes
    Sin3A-HDAC complex
     101754656
    BRAF-HDAC complex
     101754656
    REST complex
     101754656
    SHIP complex
     101754656
    MiDAC complex
     101754656
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     101754656
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    101754656
  Chromatin remodeling factors
   NuRD complex
    101754656
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 101754656
NCBI-ProteinID: XP_004975538
UniProt: K3Y7H6
LinkDB
Position
VII:19314367..19319676
AA seq 430 aa
MLEKDRISYFYDGDVGNVYFGPNHPMKPHRLCMTHHLVLSYGLHKKMEIYRPHKAYPVEL
AQFHSADYVEFLHRITPDTQDLYGSELTRYNLGEDCPVFDNLFEFCQIYAGGTLDAARRL
NHKTCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE
EAFYFTDRVMTVSFHKYGDLFFPGTGDIKDIGEREGKYYAINIPLKDGIDDASFTRLFKT
IIAKVVETYLPGAIVLQCGADSLARDRLGCFNLSIEGHAECVKFVKKFNIPLLVTGGGGY
TKENVARCWAVETGVLLDTELPNEIPNNDYIEYFAPDYTLKVPNLNMDNLNSKTYLSSIK
VQVMESLRSIQHAPGVQMQEVPPDFYIPDFDEDELDPDERVDQHIQDKQIHRDDEYYEGD
NDNDHDDGTR
NT seq 1293 nt   +upstreamnt  +downstreamnt
atgctggagaaagaccggatatcctacttctacgacggagatgtgggcaatgtctacttt
gggccaaatcaccccatgaagccacatcgtctttgtatgacgcatcaccttgttctttca
tatggacttcataaaaagatggagatatatagaccacacaaagcatatccagtagagctt
gcccagttccattctgctgattatgtggaattcttgcaccggataactcctgacacccag
gacctatatggaagtgaattaactagatacaatcttggagaagactgcccggtctttgat
aatttgtttgagttctgccaaatctatgctggaggaactttagatgctgctcgcagatta
aatcataaaacatgtgatattgccattaattgggccggtgggctgcatcatgcaaaaaag
tgtgaggcatcaggcttctgctacattaatgatctagtcttgggaatcctggagcttctc
aagtaccatgccagggttctttatattgacattgatgtccatcatggagatggagttgaa
gaagccttttatttcactgacagggtaatgactgtgagtttccacaagtatggtgacctg
ttctttcctggcacgggtgatattaaggatattggagaaagggaaggaaaatattatgcc
atcaacattccacttaaagatgggatagatgacgccagctttactcggctttttaaaaca
attattgccaaggttgttgagacatatttgcctggtgccattgttcttcaatgtggggct
gattcattggcaagggaccgtctaggctgcttcaatctctccatcgaaggccatgctgaa
tgtgtaaagtttgttaagaaattcaatattccccttctggtaactggaggtggtggatac
accaaggagaatgtagcacggtgttgggctgttgaaactggggtccttttagacacagaa
cttccgaatgagattccaaacaatgattacattgaatactttgctccggattatacattg
aaagttccaaatctgaacatggacaatttgaatagtaagacctatctcagttcaatcaaa
gtgcaagtcatggagagtctgcgctccatacagcacgcgcctggcgttcagatgcaagag
gttccacctgatttttatatcccagattttgatgaagatgagctggatcctgatgagcgt
gttgaccagcatatccaagacaagcagattcaccgtgatgatgagtactatgaaggtgac
aatgacaacgaccatgacgatggcacacgctga

DBGET integrated database retrieval system