Setaria italica (foxtail millet): 101754656
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Entry
101754656 CDS
T02818
Name
(RefSeq) histone deacetylase 9 isoform X1
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita03082
ATP-dependent chromatin remodeling
sita03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101754656
03083 Polycomb repressive complex
101754656
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sita03036
]
101754656
Enzymes [BR:
sita01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
101754656
Chromosome and associated proteins [BR:
sita03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
101754656
HDAC complexes
Sin3A-HDAC complex
101754656
BRAF-HDAC complex
101754656
REST complex
101754656
SHIP complex
101754656
MiDAC complex
101754656
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
101754656
Heterochromatin formation proteins
Other heterochromatin formation proteins
101754656
Chromatin remodeling factors
NuRD complex
101754656
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
101754656
NCBI-ProteinID:
XP_004975538
UniProt:
K3Y7H6
LinkDB
All DBs
Position
VII:19314367..19319676
Genome browser
AA seq
430 aa
AA seq
DB search
MLEKDRISYFYDGDVGNVYFGPNHPMKPHRLCMTHHLVLSYGLHKKMEIYRPHKAYPVEL
AQFHSADYVEFLHRITPDTQDLYGSELTRYNLGEDCPVFDNLFEFCQIYAGGTLDAARRL
NHKTCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE
EAFYFTDRVMTVSFHKYGDLFFPGTGDIKDIGEREGKYYAINIPLKDGIDDASFTRLFKT
IIAKVVETYLPGAIVLQCGADSLARDRLGCFNLSIEGHAECVKFVKKFNIPLLVTGGGGY
TKENVARCWAVETGVLLDTELPNEIPNNDYIEYFAPDYTLKVPNLNMDNLNSKTYLSSIK
VQVMESLRSIQHAPGVQMQEVPPDFYIPDFDEDELDPDERVDQHIQDKQIHRDDEYYEGD
NDNDHDDGTR
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgctggagaaagaccggatatcctacttctacgacggagatgtgggcaatgtctacttt
gggccaaatcaccccatgaagccacatcgtctttgtatgacgcatcaccttgttctttca
tatggacttcataaaaagatggagatatatagaccacacaaagcatatccagtagagctt
gcccagttccattctgctgattatgtggaattcttgcaccggataactcctgacacccag
gacctatatggaagtgaattaactagatacaatcttggagaagactgcccggtctttgat
aatttgtttgagttctgccaaatctatgctggaggaactttagatgctgctcgcagatta
aatcataaaacatgtgatattgccattaattgggccggtgggctgcatcatgcaaaaaag
tgtgaggcatcaggcttctgctacattaatgatctagtcttgggaatcctggagcttctc
aagtaccatgccagggttctttatattgacattgatgtccatcatggagatggagttgaa
gaagccttttatttcactgacagggtaatgactgtgagtttccacaagtatggtgacctg
ttctttcctggcacgggtgatattaaggatattggagaaagggaaggaaaatattatgcc
atcaacattccacttaaagatgggatagatgacgccagctttactcggctttttaaaaca
attattgccaaggttgttgagacatatttgcctggtgccattgttcttcaatgtggggct
gattcattggcaagggaccgtctaggctgcttcaatctctccatcgaaggccatgctgaa
tgtgtaaagtttgttaagaaattcaatattccccttctggtaactggaggtggtggatac
accaaggagaatgtagcacggtgttgggctgttgaaactggggtccttttagacacagaa
cttccgaatgagattccaaacaatgattacattgaatactttgctccggattatacattg
aaagttccaaatctgaacatggacaatttgaatagtaagacctatctcagttcaatcaaa
gtgcaagtcatggagagtctgcgctccatacagcacgcgcctggcgttcagatgcaagag
gttccacctgatttttatatcccagattttgatgaagatgagctggatcctgatgagcgt
gttgaccagcatatccaagacaagcagattcaccgtgatgatgagtactatgaaggtgac
aatgacaacgaccatgacgatggcacacgctga
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