Setaria italica (foxtail millet): 101764751
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Entry
101764751 CDS
T02818
Name
(RefSeq) DNA excision repair protein CSB
KO
K10841
DNA excision repair protein ERCC-6
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
101764751
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sita03036
]
101764751
03400 DNA repair and recombination proteins [BR:
sita03400
]
101764751
Chromosome and associated proteins [BR:
sita03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
101764751
DNA repair and recombination proteins [BR:
sita03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
101764751
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
Motif
Other DBs
NCBI-GeneID:
101764751
NCBI-ProteinID:
XP_004967913
UniProt:
K3XDW8
LinkDB
All DBs
Position
V:5810127..5815461
Genome browser
AA seq
1212 aa
AA seq
DB search
MDEEDDDQRLLHSLGVTSANIEDIEKKILSQAQADLKNDTEQGTTANDNEESDAGVPEAD
TQAKLHQKLRSVQLEIDAVASTIKRAKHAAGKQVDSSDSGDAKDKKKQKQKHADHTAQDD
PHGGALQQALATERLKSLKKAKAQIQKEISQSDPCLSGSDKRKDKMLAMLVEEEPKRKKK
TLLPSRGPKKMSAPRLKTMSYNDDDDFDAVLDGASAGFMETEREELIRKGLLTPFHKLKG
FEKRVELPGPSHMQNDPTDQVEETMEASRIAKFAQSMQQIAQSRPTTKLLDPESLPKLDA
PTTPFQRLGRPLKRPVSPSSEEQEKKRRRNKTKRPLPDKKWRKANSNKESLLETDDEDDG
DIAASVSEDEDQAAEGFDGLPPVILEGGLRIPGTVYDQLFDYQKVGVQWLWELHCQRAGG
IIGDEMGLGKTVQVLTFLGSLHNSGMYKPSIVICPVTLLQQWKREASRWYPKFKVKILHD
SANGSNKKSKAYSDSDSEASWDGDQEEIRRAKPAKKWDDLISSVINSGSGLLLTTYEQLR
ILGEKLLDIEWGYAVLDEGHRIRNPNAEITLVCKQLQTVHRIIMTGAPIQNKLSELWSLF
DFVFPGKLGVLPVFETEFSVPITVGGYANATPLQVSTAYRCAVVLRDIIMPYLLRRMKAD
VNAQLPKKTEHVLFCSLTPEQRATYRAFLASSEVEQIFDGNRNSLYGIDVLRKICNHPDL
LEREHAAQNPDYGNPERSGKMKVVEQVLRVWKDQGHRVLLFTQTQQMLDILENFLTACDY
QYRRMDGLTPAKQRMALIDEFNNTDEIFVFILTTKVGGLGTNLTGANRIIIYDPDWNPST
DMQARERAWRIGQTRDVTVYRLITRGTIEEKVYHRQIYKHFLTNKVLKNPQQRRFFKARD
MKDLFTLQDDEGNGSTETSNIFSQLSEDVNIGVPSEGQQDQVHIALTMPSTSEAEPPSGV
KGKVDENSDQADEESNILKSLFDAQGIHSAINHDAIMNANDDQKVRLEAEASQVAQRAAE
ALRQSRMLRSRDSFAVPTWTGRSGAAGAPSSVRRKFGSTVNSQLISSSQPPETSSSRSQS
LPVGALNGKAMSSAELLAKIRGTREGAASDALEHQLNGGSGSNHVLGPSGNSGRSSNSSN
PSMIVQPEVLIRQLCTFIQQNGGSASSTSITEHFKSRIQSKDMLLFKNLLKEIATLQRGA
NGAMWVLKPDYE
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggaggacgacgaccagcgcctgctgcacagcctcggcgtcacctccgccaac
atcgaggacatcgagaagaaaatcctctcacaggctcaagctgacctgaagaatgataca
gaacaaggaacaactgccaatgacaatgaggagagtgatgccggcgtgcctgaggctgac
acacaggccaagctgcatcagaagctgcgctccgtgcagctcgagatcgacgccgtagct
tccaccatcaaaagagctaagcatgcagccgggaagcaggtggacagctcggacagtggt
gacgcaaaagataagaagaagcagaagcagaagcatgccgatcatacagctcaggacgat
cctcatggaggagccctccagcaggcacttgccaccgagcgccttaagagcctcaagaaa
gctaaagctcagattcagaaagagatatcgcagtcggatccctgcctgtcgggctcggac
aagcggaaagataagatgctggccatgctggttgaagaggagccgaagcgtaagaagaag
acactattgccgtctcgagggcctaagaagatgtcggcacctagactgaaaaccatgagt
tacaacgatgacgacgacttcgacgcagtgcttgatggggcatctgcaggatttatggaa
actgaaagggaagaattgatcagaaagggcttgctgacaccgtttcacaagttgaagggc
tttgagaagcgtgttgagctacctgggccttctcatatgcaaaatgatcccactgatcaa
gtcgaagaaaccatggaagcttccaggattgctaaatttgcccagtcgatgcagcagatt
gcacaaagccgcccaacaaccaaattgcttgatccagaatctttacctaaacttgatgca
ccaactactccatttcaaaggctaggaagacctctaaaacgtcctgtttctcctagttct
gaagagcaggaaaagaagagacgaaggaataagaccaagaggcccttgcctgacaagaaa
tggaggaaagccaactcaaacaaggaatcactattggaaaccgacgatgaggatgatggg
gacattgcggcatcggtttctgaggatgaagatcaagcagcagagggttttgatgggtta
cctcctgttatccttgaaggtggtttgagaattcctggcacagtttatgatcagctattt
gactaccaaaaagtgggagtgcagtggctatgggagttacattgtcaaagggctggtgga
attattggagatgaaatgggcctagggaagactgtgcaagtcttaacgtttcttggttct
ttgcataacagtggcatgtacaagcccagcattgtcatctgtcctgtaacccttctgcaa
cagtggaaaagggaggccagtcgatggtatccgaagtttaaagtgaaaatcttacacgat
tctgcaaatggttcaaataaaaagagcaaggcatatagtgattctgacagtgaagcctct
tgggatggtgatcaggaagagattagacgtgcaaagcctgcaaagaagtgggatgatttg
atttcaagtgtcattaattcaggatcaggtttgcttttgactacatatgagcagctaaga
atcttaggggagaagttgcttgatatagaatggggatatgctgtgttggatgagggtcac
cgtataaggaatccaaatgctgagataacactggtgtgcaagcaactgcagactgtgcac
aggataatcatgacaggtgcacctattcaaaataaactttctgaactctggtcccttttc
gatttcgtgttccctggaaaactgggtgtgctgcctgtatttgagactgaattttctgtg
ccaattactgttggtggttatgctaatgcaacgccattgcaagtgtccacagcatacaga
tgcgctgttgtcctacgtgatattatcatgccataccttcttaggcgcatgaaagctgat
gtcaatgcacagctccccaagaaaacagagcatgttcttttctgtagtctaactcctgag
cagcgtgctacttatcgtgctttccttgctagttcagaggtggaacaaatatttgatggc
aatagaaattcactgtatgggatagatgtcctaaggaagatatgcaatcatcctgatcta
cttgagcgagagcatgctgctcagaatcctgactatgggaatcctgagagaagtggaaag
atgaaagtggttgagcaagttcttagagtctggaaggaccaaggccaccgtgttcttctt
ttcactcagactcaacaaatgcttgacattttggagaacttcttgacggcctgtgactac
caataccgaagaatggatggactaacgcctgcaaaacaaaggatggcactaattgatgag
ttcaataacactgatgaaatttttgttttcattctgacaacaaaagttggtggactgggt
acgaatttgactggtgcaaacaggattattatttatgatcctgactggaatccttcaaca
gacatgcaggccagggaacgtgcatggagaattgggcaaactagagatgtgacggtttac
aggctgatcacgcgtgggacgatagaggagaaagtctatcatcgacagatatacaagcat
ttccttactaacaaagtactgaaaaaccctcagcagagaagattctttaaagccagagac
atgaaggatttattcacactacaagacgatgaagggaatggttcaactgaaacatcaaat
attttcagtcagttgtctgaagatgtgaatattggggttccaagtgaaggtcaacaagat
caggtacatattgctttgacaatgccaagcaccagtgaggcagaaccacctagtggagtg
aaagggaaggtggacgagaactctgaccaagcagatgaagaatcaaacattttgaagtct
ctctttgatgcccagggcattcatagcgcaatcaatcatgatgccataatgaatgctaat
gatgaccagaaggtgcgcctagaagcagaggcctcacaggtggcacaaagggcagctgaa
gctttacgtcaatctcggatgctcagaagccgtgacagctttgctgttcccacatggact
ggaagatctggtgctgctggggcaccctcctctgttcgcaggaagtttgggtccacagtc
aacagccagttgatcagttcgtcacagccaccagaaacttcaagcagcaggagccaaagt
cttccggtgggtgctctaaatggcaaggcgatgtcgtctgcggaacttttggccaagatt
cgtggaacccgagagggggctgcttcagatgcattggagcatcaactcaatggaggatca
ggttcgaatcacgtattgggtccatctgggaacagcggccgttcatctaactcttctaac
ccaagcatgatcgtgcaacctgaagtcctgatccgtcagttgtgcacattcatacagcag
aatggtgggtctgccagctccacgagcataacggaacacttcaagagccgcatacagtca
aaggatatgcttctcttcaagaacctgctgaaagagatagcgactttgcaaagaggcgcg
aacggtgccatgtgggtgctgaaacctgattacgagtga
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