Setaria italica (foxtail millet): 101765800
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Entry
101765800 CDS
T02818
Name
(RefSeq) syntaxin-43
KO
K08489
syntaxin 16
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
101765800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sita04131
]
101765800
Membrane trafficking [BR:
sita04131
]
SNARE
Syntaxin (Qa)
Stx-TGN / EE
101765800
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNARE
Syntaxin_2
GCP_C_terminal
EF-G-binding_N
FlxA
Prominin
MCPsignal
Motif
Other DBs
NCBI-GeneID:
101765800
NCBI-ProteinID:
XP_004964366
UniProt:
K3XY82
LinkDB
All DBs
Position
IV:complement(777830..782270)
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AA seq
325 aa
AA seq
DB search
MATRNRTPLYRKYRDALRHVRSPVGAPSSSGGGGGGGGGGPVIEMASLLRSDRPYAPLST
DDPSGSSRGAVTVGLPPAWVDVSEEISANMQRAKMKMGELAKAHAKALMPSFGDGRDDQR
AIEVLTHEITDLLKRSEKRLQKLSMKDSSEDSNVRKNVQRSLATDLQNLSMEFRKKQSSY
LKQLRQQKEGQDGVDLEMSINGTKSTFEDDEFEDVGFTEVQMSKLKKSEAFTREREREIE
QVVESVNELAQIMKDLSVLVIDQGTIIDRIDYNIQNVAASVEEGYKQLQKAERTQKKGGM
VMCATVLVILIFIMIVLLILKKIIF
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgcggaaccggacgccgctctaccgcaagtaccgcgacgcgctgcgccacgtc
cgctcgccggtcggggcgccgtcgtcgtccggcgggggcgggggaggaggcggcggcggg
ccggtgatcgagatggcctcgctgctgcgctccgaccgcccctacgcgcccctcagcacc
gacgacccctccggttccagtagaggtgctgtgacggtcgggttgcccccagcctgggtg
gatgtttccgaagagatatctgcaaacatgcagcgggcaaagatgaaaatgggagagttg
gctaaggcacacgctaaagccttgatgccatcatttggcgatggcagagacgaccagcga
gcaatcgaggttctcacacatgagataactgacttgctgaagaggtcagagaagaggctg
cagaagctgtccatgaaagattcatcggaggattcaaacgtccgaaagaatgtccagcgc
tctcttgctacagacctgcaaaacctctcaatggagttccgtaaaaagcagtcatcttat
ctaaagcagcttcgccaacaaaaagagggtcaggatggtgttgacttggaaatgagtata
aatgggacgaagtctacatttgaagatgatgagtttgaggatgtgggtttcactgaggtt
cagatgtcaaaacttaagaaaagcgaagcattcaccagagaaagggaaagagaaatcgaa
caggttgtcgaatcagtcaacgagcttgcacagatcatgaaggatctttcagttcttgtg
attgatcagggaactatcattgaccggatagactacaacatacagaatgttgcagcttct
gttgaggagggctacaaacaattgcaaaaggctgagaggacgcagaagaaagggggcatg
gtgatgtgtgccactgtccttgtcattctgatcttcatcatgatcgtccttctgattttg
aagaagatcattttctga
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integrated database retrieval system
