Setaria italica (foxtail millet): 101767855
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Entry
101767855 CDS
T02818
Name
(RefSeq) serine/arginine repetitive matrix protein 1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita03013
Nucleocytoplasmic transport
sita03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101767855
03015 mRNA surveillance pathway
101767855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sita03019
]
101767855
03041 Spliceosome [BR:
sita03041
]
101767855
Messenger RNA biogenesis [BR:
sita03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
101767855
Spliceosome [BR:
sita03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
101767855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
101767855
NCBI-ProteinID:
XP_004984929
UniProt:
K4A5U4
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All DBs
Position
IX:complement(50632448..50640640)
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AA seq
842 aa
AA seq
DB search
MSGGFFRGTSADQDTRFSNKQAKLLKTQKFAPELDHLVDMSKVKMDVMKPWIAKRVTELL
GFEDEVLINFIYGLLEEKEADGKKIQIQLTGFMEKNTVKFMKELWGLLLSAQQNASGVPQ
QFLDEKEAEIQQRKAEDDRIAQEIQKKREKEGIDLELEKQKMMDGDTSNSRSYGDPNGSA
LNKTNIDATEEMELDFKRSSRTKNRGSRRSRSISLSPHGRQRSISPRKRSRSPSRRSRSI
DRHRRSSRRSTSPRRSASPRRHSPRSTPSISRRRSPYSRRGSPSLSRYPSPPSRRRSPLR
RKSPSSGSRRSPSPRHRRSPARAPRRSPSPARRRSPVRHRFSPGRHRSPSPARRRPRSPS
PGRRRPRSPSPGRRRPRSPSPGRRRPRSPSPGSRRPRSPSPGRRRPWSRSPVKRRSPSPK
RRRRSPSSPKTRYANRRPSPQRRRSISPYSSKSPNRSRRSLSVEIEKGTNGTPSTKDRVV
PERDRERRSGDDSDRDGARTGDHRSPDSERRLSNSLRPPNNEERNSTRDRSSGKQLPSQD
STDTSGDEDEGSRARESARKANSARRKTKDFSADRQLNKVGAGVLSPGEKSPFMLQSGKG
VQKKHPDQLSESSEDELVGRRMKRRTDSPDERSPPRIEKDDSHSKDERNSERAVRGSRDD
SDNATGAKKYFSKVNEGSQSEDGSPVKKLKKRTDVKSHIDSGSSGSEEPDKHRSHSEKQR
NKKAHKHKKQYDDSSESDSEPDGKEAKRRRKEEKKLRKEERRRRREERHRRRAERHASKQ
KSKHSDTVAPSDSEKDRDSDSDVDVRKRGSPVGREESDQKKLEIELREKALESLRAKKAI
NN
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcggcttcttccgggggacgtccgctgaccaggacacgcgcttctccaacaag
caggccaagctgctcaagacgcagaagttcgcgcctgagcttgaccacttggtggacatg
tcaaaggtcaagatggatgtgatgaagccctggatcgccaagcgagtcactgagcttctc
gggttcgaggacgaagtgcttatcaacttcatctatggcctcctcgaagagaaggaggcg
gatgggaagaagatccagatccagctgacagggttcatggagaagaacacagtgaagttc
atgaaggagctctggggcctcctcttaagtgcgcaacagaatgccagtggggtacctcaa
cagtttctagatgaaaaggaggctgaaatacagcagagaaaggcggaggatgatagaatt
gcacaggagatccaaaagaagcgggagaaagagggaatagacttagaactggagaagcag
aaaatgatggatggggatactagcaactcaagatcctatggtgatccaaatggctctgct
ttaaataaaacaaatatcgatgccacggaagaaatggaattggacttcaagcgcagctca
agaacaaagaaccggggaagtcgcagatccaggagcatatctttgtcaccccatggtagg
caaagatctatttctcccagaaagcgttctcgatctccttccaggcgttcccgctccatt
gatagacatcgtagatcatcacggcgttcaacttcacctagacgctctgcttctccccga
aggcattctccaagaagtaccccttcaatttctagaaggagatcaccttattcaaggaga
gggtcaccttcactgtcaaggtatccgtccccaccttcacgcaggagatctcctcttcgc
agaaaatcaccatcatctggatcacgaaggtcaccttctcctcgccatcgtcgttcacca
gctcgtgcgccaaggaggtcaccatctcctgcacgtcgaaggtctcctgttcgacacaga
ttttcaccaggcagacatcgatctccatctccagcaaggcgtaggccaaggtccccatct
ccaggaaggcgaaggccaaggtccccatctcctggaaggcgcaggccacggtccccatct
ccaggaaggcgcagaccacggtccccatctcctggaagccgcaggccacgctccccatct
cctggaagacgtaggccatggtctcgatcgccagtaaaacgtcggtccccatctccaaaa
cgccgaaggagatccccaagttcaccgaaaactcgttatgcaaatcgacgtccatctcca
cagcggagaaggagtatcagtccgtacagtagcaaaagtcctaatcgttctcgccggagt
ttgagtgtggagattgagaaaggaacaaatggcaccccctccactaaagacagagttgtg
cctgaaagggaccgagaacgaagatcaggtgatgatagtgacagggatggtgcaaggact
ggtgatcatcgttccccagattctgaacgtaggttgtcaaattccttgaggccgccaaat
aatgaagaaagaaactccacacgtgataggagctcagggaaacaattacctagtcaggac
agcacagatacaagtggagatgaggacgaaggcagtcgtgctagagagagtgcacgaaaa
gcaaattcagcacgtaggaaaaccaaggatttctcagcagatcggcagctgaataaagtt
ggagctggtgtcttaagccctggagaaaaatctccattcatgttacaaagtggcaagggc
gtccagaagaaacaccctgatcaactgtctgaatcatcagaagatgagcttgttggtaga
agaatgaagcgtagaactgattctcctgatgagcgttccccacctagaattgaaaaagat
gactcgcattcaaaggatgagaggaacagtgagcgtgccgtgaggggttcacgtgatgat
tctgataatgctactggggcaaagaaatatttttctaaagtcaatgagggctcccaatcg
gaagatggaagtcctgtcaaaaagctcaagaaaagaacagatgttaaaagccacattgat
tctggcagttcagggtccgaagaacctgacaaacatagatcccattctgagaagcaaagg
aacaagaaggcccataagcataagaaacagtatgatgatagttctgagtctgattccgag
ccagatggcaaagaggcaaagaggaggaggaaggaagaaaagaagctaagaaaagaagaa
agacgtcgtagacgtgaagagcggcatcgcagaagggcagaacgccatgccagcaaacaa
aagtcgaagcattctgatactgttgcaccttcagattctgagaaggatcgggattctgat
tcagatgttgatgttaggaaaagaggttcacccgtgggcagagaagagtctgatcagaag
aaacttgaaatcgagcttcgtgagaaggcccttgaatctcttagagccaagaaagccatc
aacaactag
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