Setaria italica (foxtail millet): 101768587
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Entry
101768587 CDS
T02818
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 29
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
sita
Setaria italica (foxtail millet)
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sita03009
]
101768587
Enzymes [BR:
sita01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101768587
Ribosome biogenesis [BR:
sita03009
]
Eukaryotic type
Pre-60S particles
Helicases
101768587
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
ResIII
Asp_Glu_race
Motif
Other DBs
NCBI-GeneID:
101768587
NCBI-ProteinID:
XP_012702600
UniProt:
K3YG80
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Position
VI:complement(25886398..25892847)
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AA seq
859 aa
AA seq
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MARLTPAKSRSTRKPKPSSSSGMDAAAEPNPEPQRRPKQDRSAGGGGGKKAKSGGSKKAK
SGGFESMGLCEEVYRGVRHKGYRVPTPIQRKTMPLILAGVDVAAMARTGSGKTAAFLLPM
LNRLRRRDPGAGVRALILSPTRDLAMQTLKFTKQLGKFTDLRTSVIVGGDSMESQFEELS
ECPDIIIATPGRLMHHLNDVKDMTLRSVEYVVFDEADSLFSMGFAEHLHDILKKLSDTRQ
TLLFSATLPSALADFAKAGLRDPQVVRLDLDKKISPDLNLVFFTLRQEEKLAALLYLVRE
RISSEEQTMIFVSTKHHVEFLNILFREEGLEPSLSYGAMDQEARMIHISKFRARKTMLLI
VTDVAARGLDIPLLDNVVNWDFPAKPKLFVHRVGRVARQGRSGTAYTFVTSEDMPYLLDL
HLFLSRPLKPAPTEEELLRDMDGINMKIDQAIANGESVYGRFPQTVLDLASDGIKEVISG
CTELNALEKPCANAFRLYLKTRAVPSKESIKRVKDLPREGLHPIFRDVLRSDELSALAFS
ERLKSFRPKQTILEAEGEAAKARNFKGSNQWLDVMKKKREVHEGIINLVHQKSSVDPRPE
EEEDGILNWEKKEVCGTKRKSQSFRDEDYYISSVPQNHHLEAGLSVRNNEGFVQNRLDAA
VLDLVDDEASGMQAQKTRYHWMKNKFVKLNSGDRVTATGKIKTEGGAKIKASATGIYKRW
QQRTHKSINIGGKSGSFAEERTSSAGGYHGGNNKHFSGGRGRRSIPNANVPSEIRNPDQM
QKSRQKKAMEITRLKNKSAKDGKFQNKFQKNRRPDGNGKGRGNGKGAGKGGFGKGLGKGG
KGPNKGGKGKGKVKGKGGR
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcctaacccccgccaagtccagatccaccaggaagcccaagccctcgtcgtcc
tccggcatggacgccgcggcggagccgaacccggagccgcagcggcggccgaagcaggac
aggtcggcgggcggcggcggcggcaagaaggccaagtccggcgggagcaagaaggccaag
tcgggcggcttcgagtcgatggggctctgcgaggaggtctaccgcggggtgcgccacaag
gggtaccgcgtgcccacgccgatccagcgcaagaccatgccgctcatcctcgccggcgtc
gacgtcgctgccatggcccgcacgggctccgggaagaccgccgccttcctgctgcccatg
ctgaaccggctccgccgccgcgacccgggcgccggggtccgcgcgctcatcctgtcccct
acgcgcgacctcgcgatgcagacgctcaagttcaccaagcagctcggcaagttcacagac
ctaagaaccagcgtaattgttggtggtgatagcatggagagtcagtttgaggagctgtca
gagtgtcctgatatcataattgccacgccaggcaggctcatgcaccatttgaatgatgtc
aaggacatgactcttcgttcagtggaatatgttgtgtttgatgaagcggattccttgttt
agcatggggtttgcggaacatttgcatgatattctgaagaagttaagtgatacacgacaa
acgttgctctttagtgccactttgccaagcgcccttgcagacttcgcgaaagctggtctg
cgtgatccgcaggtggtgaggctcgatttggacaaaaagatcagtcctgatctcaacctt
gtcttcttcacactgcgccaggaagaaaagcttgctgccttactgtatttggtcagggag
cgcatcagctctgaggagcagacaatgatttttgtttcaaccaagcatcatgtagagttc
ttgaacattttgttcagagaagagggtttagaaccttccttatcctacggtgctatggat
caagaggctcgtatgattcatatttcaaaattcagggcaaggaagactatgctacttatt
gtgacagatgttgctgcaaggggcttggatattccactgctggataatgtagtgaactgg
gacttccctgcaaagcctaagttatttgttcatagagttggtcgagtagctagacaaggt
agaagtggaacagcatatacatttgtgacttcagaggacatgccatatttactggaccta
catcttttcctttcaaggcctctcaaacctgctccaacggaagaggagcttctaagagac
atggatggtataaatatgaaaatcgatcaagccattgcaaatggggaatcagtgtatggc
cgttttcctcaaacagtccttgatcttgcctctgatggaataaaagaagtcattagtgga
tgtacggagttgaatgcgttggaaaagccatgtgctaatgctttcagattgtatctgaaa
actcgtgctgtgccttcgaaagaatctatcaaaagggtaaaagatttgcctcgtgagggt
cttcatccaattttcagggatgttcttcggtcagatgagctttctgctcttgcattctca
gaacgtctgaaatcatttcggccaaagcagactattttagaggctgaaggtgaagctgct
aaagcaagaaattttaagggttctaatcaatggctagatgtgatgaagaagaaacgagaa
gttcatgaggggattataaatttagttcatcaaaagagttctgttgatccaaggccggag
gaagaagaggatggcattttaaattgggagaagaaagaagtttgtggtacgaaacggaag
tcacagagctttagagacgaggactactacataagttcagtacctcagaaccatcatttg
gaagctgggttgtcagtgaggaacaatgaaggatttgttcaaaacagattggatgctgct
gttcttgatttagtcgatgatgaagcctctggtatgcaagcacagaaaactcgatatcac
tggatgaagaacaagtttgtcaagttgaacagtggggatcgtgtgacagctactggaaag
attaaaacggaaggtggtgcgaagataaaggcatcagcaacagggatctataagagatgg
cagcagaggacacacaaatcaatcaatattggtgggaaatctggcagctttgcagaagag
cgcacatccagtgcaggtggttatcatggagggaacaataaacacttctcaggtggccgt
ggacgcaggtccataccgaacgccaacgtaccctccgagataaggaaccctgatcagatg
cagaagagtaggcagaagaaggcgatggagatcacacggttgaagaacaaatccgcaaag
gatggcaaattccagaacaagttccagaagaaccggaggcccgacgggaacggcaagggg
aggggaaacgggaagggagctgggaaaggtgggtttgggaaagggctcggtaaaggcggg
aaagggcccaacaaaggcgggaaaggcaagggtaaagtgaaggggaagggtggcaggtga
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