Setaria italica (foxtail millet): 101773545
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Entry
101773545 CDS
T02818
Name
(RefSeq) ABC transporter B family member 20
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
101773545
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sita02000
]
101773545
04147 Exosome [BR:
sita04147
]
101773545
04090 CD molecules [BR:
sita04090
]
101773545
Enzymes [BR:
sita01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
101773545
Transporters [BR:
sita02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
101773545
Exosome [BR:
sita04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
101773545
CD molecules [BR:
sita04090
]
Proteins
101773545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_15
AAA_21
AAA_16
nSTAND1
DUF87
AAA_30
ABC_ATPase
Motif
Other DBs
NCBI-GeneID:
101773545
NCBI-ProteinID:
XP_004971444
UniProt:
K3XDT6
LinkDB
All DBs
Position
V:complement(47182702..47190719)
Genome browser
AA seq
1399 aa
AA seq
DB search
MVSRGLFGWSPPHVQPLTPVSETSEPPESPSPYAADLGLGGDGAPPPDDDAQPPLDDADD
DPDPPPAAVPFKRLFACADRLDWALMAAGSLAAAAHGVALVVYLHLFGRAINSLHGRHTH
DLFHNINQHALYFLYIAICVFFAGWIEVSCWILTGERQTAVIRSKYVQVLLNQDMSFFDT
YGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMATFFGGLVIGLVNCWQIALLTLATGPF
IVAAGGISNIFLHRLAENIQDAYGEAASIAEQAILYIRTLYSFTNETLAKYSYATSLQAT
LRYGILISLVQGLGLGFTYGLAICSCALQLWVGRFLISHGRANGGEVVVALFAIILSGLG
LNQAATNFYSFEQGRIAAYRLYEMISRSTSIVNQDGRTLPSVQGNIEFRNVYFSYLSRPE
IPILSGFYLTVPARKTVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWL
RSQIGLVTQEPALLSLSIRENIAYGRSATTDQIEEAAKTAHVHAFISSLEKGYDTQVGRA
GLSLTEEQKIKLSIARAVLSNPSILLLDEVTGALDFEAEKAVQEALDILMLGRSTIIIAR
RLSLIRNADYIAVMEEGQLVEMGTHEELLNLDGLYAELLRCEEAAKLPKRTPIRNYKEPT
SFQIERDSSASHSFQESSSPNMSKSPSLQKTHGFLTFRNSDANHNSHESPNIQSPPSEQM
AEARLPMVASERAPSIKRQDSFEMKLPDLPKIDVPLHRQSSNTSDPESPISPLLTSDPKN
ERSHSKTFSRPLDIFDSFHAEDSKKPQTKAPSFWRLAELSLAEYFYALLGSAGAACFGSF
NPLLAYTISLIVVAYYKIGVRDVHDEVNKYCSFIVGMGIITVLANFLQHFYFGIMGEKMT
ERVRRMMFSAILRNEVGWFDDEDNSADILSMRLANDATFVRAAFSNRLSIFIQDTSAIFV
ALLLGMLLQWRVALVALATLPILIISAVAQKMWLSGFSRGIQEMHRKASLVLEDAVRNIY
TVVAFCAGNKIMELYRLQLGDILTKSFIHGMGIGFAFGFSQFLLFACNALLLWYTAAAVK
DGHLSLVTALKEYIVFSFATFALVEPFGLAPYILKRRKSLTSVFEIIDRVPKIDPDDASG
LKPPNVYGSIEFKNVDFCYPTRPEMTVLSNFSLRVNGGQTVAVVGVSGSGKSTIVSLIER
FYDPTAGQVLLDGRDLKLFNLRWLRSHMGLVPQDPVIFSTTIRENIIYARHNATESEMKE
AARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLLDEASSAIE
SESSRVVQEALDTLIMGNKTTILIAHRAAMMKHVDNIVVLNGGRIVEQGSHDSLVQLNGL
YVKLMQPHFSKGFRQRRLI
NT seq
4200 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcgcgggggctcttcggctggtccccgccccacgtccagccgctcacgcccgtc
tccgagacctccgagccgcccgagtcgccctccccctacgccgccgacctcggcctcgga
ggggacggcgccccgccgcccgacgacgacgcccagccgcccctcgacgatgccgacgac
gaccccgacccgccgcccgccgccgtccccttcaagcgcctcttcgcctgcgccgaccgc
ctcgactgggcgctcatggccgccggcagcctcgcagccgctgcccacggggtcgcgctc
gtcgtctacctccacctcttcgggagggccatcaactcgctccacggccgccacacacac
gacctcttccacaacatcaaccagcacgccttatacttcctctacatagccatctgcgtt
ttctttgctggatggatagaggtttcatgctggattttgactggggaaagacagacggca
gtgattagatccaagtatgttcaagtcctgttgaaccaagacatgagtttctttgatacc
tacggcaacaatggtgatattgtcagtcaagtactcagtgatgtcttactcattcagtcg
gctcttagtgagaaggttggaaactacattcacaacatggctacattttttggcggtctt
gtcattggcttggtcaactgctggcaaatagctttattgacattagcaaccggccccttc
attgttgctgcaggaggaatatcaaacatatttctccacaggcttgcagaaaatattcag
gatgcttatggtgaggcagcaagcattgctgaacaggcaatcttgtacattaggacttta
tactccttcacaaatgagacccttgcaaagtattcttatgctacttcacttcaagcaacg
ctgcgctatggaatacttataagtctggtgcaaggtcttggtctcggatttacatatggg
cttgccatatgttcttgtgctttacaactttgggttgggaggttcctaatctcacatgga
agagctaatggcggtgaagttgtagttgccctgtttgctattatcttgagtggacttgga
cttaatcaagcagcaacaaacttctattcctttgagcaaggacgtattgctgcatacagg
ctctacgaaatgataagccgttcaacatctattgtaaaccaggatggccgtaccttacct
tcagtgcaaggcaacattgagttccgcaatgtctacttcagttacctgtcccgcccagaa
ataccgatcttaagtggattctaccttacagtacctgctagaaagactgttgctcttgtt
ggcagaaatggttcaggaaaaagcagcataattcctctaatggaacgcttctatgaccca
accttaggtgaagtgcttttggatggggagaatatcaagaatttgaaactagagtggtta
agaagccaaataggacttgtgactcaggaaccagctttattgagcttgagcattagggaa
aatattgcctatggtagatctgccacaactgaccaaattgaagaggcagccaaaacagct
catgtgcatgctttcatcagttcactagaaaaaggatatgacacacaggttggtcgggct
ggcctttctctgacggaagaacaaaagataaagctttccattgctcgtgctgtgctctca
aatccatcaattcttctactggatgaggtcactggtgctcttgattttgaggctgagaaa
gctgttcaggaagcactagacattctaatgcttgggaggtctaccatcatcatagctcga
cgcctcagtcttatcaggaatgctgattatatagcagtaatggaggaaggtcaacttgtt
gagatgggtacacatgaagaattgttaaacctcgatggtctttatgcagaacttcttagg
tgtgaagaagcagcaaaacttccaaagaggacaccaatcagaaactacaaagagccgact
tccttccaaattgaaagggattcatcagcaagtcacagctttcaagagtcatcttcccca
aatatgtcaaaatcgccgtcacttcagaaaacacatggctttctcacattccgaaattca
gatgccaatcataactcgcatgaatcaccaaatattcaaagccccccttcagagcaaatg
gcagaagccagacttccaatggttgcttctgagagagctccatccatcaaaaggcaggac
agttttgaaatgaaattgcctgatcttcccaaaattgatgtcccgctgcaccgacagtcc
tcaaatacatcggacccagaatcaccaatatcgccattattgacttctgatcccaaaaat
gaacgctcccactcaaaaactttcagtcgccctcttgacatattcgatagtttccatgct
gaggattccaagaaaccgcaaacaaaagcaccatctttttggaggcttgcagagcttagt
cttgcagaatacttttatgctctgttaggaagtgctggtgctgcttgctttggttcattt
aatcctcttcttgcttatacaatatctctaatagtagtggcgtactacaaaataggtgtc
cgtgatgtgcatgatgaagtgaataagtactgctcattcattgttggcatgggtataatc
actgtactagctaacttcttgcagcacttctattttggtataatgggagagaaaatgact
gagcgtgtaagaaggatgatgttttcagcaattttgcgcaatgaagttggctggtttgat
gatgaagacaatagtgcagatatattatcaatgagacttgcgaatgatgcaacatttgtt
cgtgctgctttcagcaacaggctgtctatattcattcaagatacatcagccatttttgtc
gcacttcttctcggtatgttactacaatggcgtgttgctcttgtagcactggcaactttg
cccatccttatcatttccgcggttgcacagaaaatgtggctttctggcttttccagggga
atccaggagatgcacaggaaagcttctttggttcttgaagatgctgtgaggaatatctat
actgtggtggcattctgtgctggtaacaaaatcatggaactttatagattgcagcttgga
gatattctcacgaaaagctttattcatggaatgggcattggttttgcctttggcttctct
cagttccttcttttcgcgtgcaatgcacttctgttgtggtatacagctgctgctgtgaag
gatggccatcttagtttggtaactgctctcaaagaatacattgtcttctcttttgcgact
tttgcactggtggaaccatttggccttgccccttatattctgaagcgccggaaatccctg
acctcagtatttgaaattattgatcgtgtacccaagattgatccagatgatgccagtggc
ctgaaaccccctaatgtgtatgggagcattgagttcaagaatgttgatttttgctaccct
acgcgccctgagatgacggtcttgagtaattttagtctcagagtcaatggaggacaaact
gttgccgtagtaggtgtatcagggtcagggaagagcacgatagtttctttgatcgagagg
ttctatgatccaactgctggccaagtgttgttggatggccgtgatttgaagttgttcaac
ttgagatggttgcggagtcacatggggttggttcctcaggaccctgttatattttcgaca
accataagagaaaacataatatatgcaaggcacaatgcaactgaatctgagatgaaagaa
gctgccaggatcgctaatgcccatcacttcattagcagcctgcctcatggttatgacacg
catgtgggaatgcgcggggtggatttgactcctgggcagaagcagcggattgctattgct
cgcgtggtgttgaagaatgcacccattttattgcttgatgaagccagctctgctatcgaa
tctgagtcgagtagggtggtccaggaagcccttgacacattgatcatggggaacaagaca
acgattctcattgcgcacagggcagcgatgatgaaacatgtggataacattgtggttttg
aatggcggtaggatcgtcgagcagggatcgcatgattcgctggtgcagttgaatggtttg
tatgtgaagttgatgcagcctcacttcagcaaagggttccgtcagcgtagactaatatag
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