Setaria italica (foxtail millet): 101773649
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Entry
101773649 CDS
T02818
Name
(RefSeq) protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5
KO
K12199
vacuolar protein sorting-associated protein VTA1
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
101773649
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sita04131
]
101773649
Membrane trafficking [BR:
sita04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
101773649
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vta1
Vta1_C
Motif
Other DBs
NCBI-GeneID:
101773649
NCBI-ProteinID:
XP_004965318
UniProt:
A0A368QUD9
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Position
IV:15256378..15261244
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AA seq
485 aa
AA seq
DB search
MGSDAEPAKGLLPYLQRADELQKHEPLVAYYCRLYAMEKGLRIPQKERTKTTNSILISLM
NQLEKDKKTLTLGPDDNLHLEGFALNVFAKADKQDRAGRADINTAKTFYAASIFFEILNQ
FGELQPDIEQKQKYAIWKAAEIRKALKEGRKPEAGPPGGDKDETPVSTTTISQDMGRSQS
FNSMQHGTEAPSPPVDKDFSRRDSFSALQPGNNVHRQNTEFNDHPSTQSPYNYSPPAPSQ
PQHPSPSQSYSSPSYQATDYPSSDSHKQNPNHSSPPYTSTDYPTNEVHKPPSNYSPPPYT
RTDYPSNDGYNPHSNDKPDVSPYPQTYQPPPYTIEPQHTSQNFYSTEAPAAPYNYPNFQS
YPSFQDSTSPSVPTHQSPSVPTHQSSFYSASDGPAATSYSPASNPSAPTHYHSTADSSPQ
VTPAVPPASQYKYDSTYQPAVEKIAEAHKAARFAVGALAFDDVSVAVDHLKRALDLLTNP
SAETH
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggggagcgacgcggagcccgccaaggggctgctgccatacctgcagcgcgccgacgag
ctgcagaagcacgagcccctcgtcgcctactactgtcggctctacgcgatggagaagggg
ctgaggatcccgcagaaggagcgcaccaagaccaccaactccatcctcatctccctcatg
aaccagctcgagaaggacaagaaaaccttgactttggggccagacgacaaccttcatttg
gagggatttgcattaaatgtttttgctaaagcagataaacaggaccgtgctggacgagct
gacataaacacagctaagaccttctatgctgcgagcatcttcttcgagattcttaaccag
tttggcgagcttcaacctgatattgagcagaagcagaaatatgccatctggaaggctgct
gaaataaggaaagctctcaaagaaggacggaagcctgaagctggccctcctggtggggat
aaggatgaaacacctgtcagtaccaccacaatttctcaggatatggggcgaagccagtcc
ttcaacagtatgcagcatggcactgaagcaccatctccacctgtagacaaggattttagt
aggcgggatagcttttctgctctgcagccaggaaataatgtgcatcgacaaaatacagag
ttcaatgatcatccctctacccagtcaccctataactattcacccccagcaccctcacaa
ccccagcatccttctccgtcacaatcttattcctctccctcgtaccaagcaacagactat
ccttcttctgattcccacaaacaaaaccccaatcattcatctcctccctacacaagcaca
gactaccctaccaatgaggtccacaaaccaccatccaattattcaccacccccttacacc
aggacagactacccttccaatgatggctacaatcctcatagcaatgataaaccagatgtt
tcgccatatcctcagacataccaacccccaccctacacaattgaacctcagcacacctct
caaaacttttactccactgaagccccagctgctccatacaactaccctaatttccagtca
tatccaagtttccaggacagcacgtcgccttctgtcccaacacatcaatcaccttcagtc
ccaacacaccaatcttcattctacagtgcaagtgatggccctgcagctacatcatactcc
cctgcgtcaaatccctctgccccaacacattaccactctactgctgactcttcaccccaa
gttactccagctgtgccaccagctagccaatataagtatgatagcacttaccagccagca
gttgagaagatagccgaggcacacaaggcagcaagatttgcggttggtgctcttgcattc
gatgacgtttctgttgctgtggatcacctgaaacgcgcgctggatcttctcacaaaccct
tctgctgaaactcattag
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integrated database retrieval system
