Setaria italica (foxtail millet): 101783489
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Entry
101783489 CDS
T02818
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 12 isoform X1
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
101783489
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sita01002
]
101783489
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sita04121
]
101783489
Enzymes [BR:
sita01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
101783489
Peptidases and inhibitors [BR:
sita01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
101783489
Ubiquitin system [BR:
sita04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
101783489
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH
UCH_1
Malt_amylase_C
Motif
Other DBs
NCBI-GeneID:
101783489
NCBI-ProteinID:
XP_004962965
UniProt:
K3Z3B3
LinkDB
All DBs
Position
III:complement(46506661..46519361)
Genome browser
AA seq
1122 aa
AA seq
DB search
MTMMTPPPLEQQQEDEEMLVPHQELPVAGPEPAPQPMEVVAQTEPANTAESQPAEDPQTS
RFTWTIESFSRLNTKKHYSDVFVVGGYKWRVLIFPKGNNVDHFSMYLDVADSGNLPYGWS
RYAQFSLAVVNQIHPKYTIRKDTQHQFNARESDWGFTSFMPLSDLYDPSRGYLVNDTVVV
EAEVAVRRMVDYWTYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTEN
DMPSGSIPLALQSLFYKLQYSDNSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLED
KMKGTVVEGTIEQLFEGHHINYIECINVDYKSSRKESFYDLQLDVKGCRDVYASFDKYVE
VERLEGDNKYHAEQYGLQDAKKGVLFLDFPPVLQLQLKRFEYDYMRDTMVKINDRYEFPL
QLDLDRDEGKYLSPDADRSIRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDER
VTKEDTKKALEEQYGGEEELPQINPGFNNTPFKFTKYSNAYMLVYIRESDKEKIMCNVDE
KDIAEHLRIRLKKEQEEKEHKKKEKAEAHLYTIIKIARDEDLKDQIGKNIYFDLVDHEKV
RSFRIQKQLPFTSFKEEVAKEYGIPVQFQRFWLWAKRQNHTYRPNRPLTAHEEAQSVGQL
REVSNKAHNAELKLFLEVELGPELRPIRPPEKSKEDILLFFKLYDAEKEELRFVGRLFVK
ALGKPSEILTKLNEMAGFSPNEEIELYEEIKFEPNVMCEHIDKKLTFRSSQLEDGDIICF
QKAPVPDGDTQVRYPDVPSFLEYVHNRQVVHFRSLDKPKDDDFSLELSKLHTYDDVVEKV
AHQLGLDDPSKIRLTSHNCYSQQPKPQPIRYRGVEHLLDMLVHYNQTSDILYYEVLDIPL
PELQCLKTLKVAFHHATKDEVVVHSIRLPKNSTISDVITDLKTKVELSNPDAELRLLEVF
YHKIYKIFPPHEKIENINDQYWTLRAEEIPEEEKNLGPHDRLIHVYHFMKDPNQNQQIQN
FGDPFLMVIREGETAAEVMERIQRKLRVPDEEFSKWKLAFISMNRPEYLQDTDVVSARFQ
RRDVYGAWEQYLGLEHTDTTSKRSYTANQNRHTYEKPVKIYN
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atgactatgatgacgccgccccctctcgagcagcagcaggaggacgaagagatgctcgtg
ccgcaccaggagctccccgtcgccggccccgaacccgccccgcagccgatggaagtcgtc
gcgcagacggagcccgccaacacggctgagagtcagccggcggaggacccgcagacgtcg
cgcttcacctggacgatcgagagcttcagccgcctcaacactaagaagcactactccgac
gtgtttgtcgtcggagggtataaatggcgtgtgctgatcttccccaaggggaacaatgtg
gatcacttctcgatgtatttggatgtcgcggattcggggaacctcccgtacgggtggagc
cgttatgctcagttcagcttggccgttgtgaaccaaatccatcccaagtatacgatacgg
aaagatacccagcaccaatttaatgcacgtgagagcgactggggtttcacatcatttatg
cctttgagtgacctatatgacccaagcaggggctatcttgtgaatgacactgttgtagta
gaagctgaggtggctgtgcgaagaatggttgattattggacttacgattcgaaaaaagaa
acaggttatgtaggtctcaagaatcaaggtgctacctgttatatgaactctctcctacaa
acgttgtaccatataccatacttcagaaaggctgtatatcatatgccaacaactgagaat
gacatgccatctgggagtattcctctggcccttcagagccttttttacaagctccagtat
agtgacaacagtgtggctacgaaagagttgaccaaatcctttggatgggatacttatgat
tctttcatgcagcatgatgtgcaagagctcaacagagttctttgtgagaagcttgaagat
aagatgaagggaactgttgtggaaggaacaattgaacaattatttgaaggccaccacatt
aattatatcgagtgcatcaatgtggactataaatctagcagaaaagaatcattttatgat
ctgcaacttgatgtgaaaggttgtcgtgacgtttatgcatcatttgataaatatgtggaa
gtggagcgtttagagggtgataacaaatatcatgcggagcaatatggcttacaggatgca
aagaaaggtgtgctcttccttgatttccctcctgttttgcaacttcaactgaagcgtttt
gaatatgattacatgcgagatacaatggttaagattaatgaccgttatgagttcccgcta
caacttgatcttgatagagatgaaggaaaatatctttctccagatgcagatcgtagtatt
agaaacctttatacgcttcacagtgttcttgttcatagtggaggagtacatggtggtcac
tattatgctttcattcggccgacactctcagatcagtggtacaaatttgatgatgagcgg
gttacgaaagaagatacgaaaaaggcacttgaagagcagtatgggggtgaggaagagttg
cctcaaataaaccctggtttcaataacacgccgttcaagttcacaaagtattccaatgcc
tacatgcttgtctacattcgtgagagtgacaaggagaaaataatgtgtaatgttgatgag
aaggatattgcggagcatttgcggataaggttgaagaaagaacaagaagagaaagaacac
aagaaaaaggaaaaggctgaagcacacctctacactatcataaagattgctcgagatgaa
gatttaaaggatcagattggtaagaacatatattttgacctggtggaccacgaaaaagtt
cgcagcttccgcattcagaagcagttgccttttacttcattcaaggaggaagttgcaaag
gaatatggcatacctgtacagtttcagcgcttctggttgtgggctaagaggcagaaccat
acataccggccaaatcgtccgttgaccgcccatgaagaagcacaatcggtcgggcagctt
agggaagtctcaaataaggcacacaatgctgagttgaagctgttcctggaagttgaactt
ggaccggagttacgtccaattcgtccaccagagaagagcaaagaagacatactacttttc
ttcaagctttatgatgctgagaaggaagagctcaggtttgttggtagacttttcgtgaag
gctttgggaaagccatctgaaatattgacgaagctaaatgaaatggcagggttttctcca
aatgaagaaatagagctatacgaggaaattaagtttgagccaaatgtgatgtgtgaacat
attgacaagaaactaactttccgttctagtcagcttgaagatggagacatcatctgtttc
caaaaggctcctgttcctgatggtgatacacaagtgcgctatccagatgttccttcattc
ttggagtatgttcacaataggcaggttgtgcactttcggtctctggacaaacctaaggat
gatgatttttctttggaattgtcaaagcttcatacttatgatgatgttgttgagaaagtt
gcgcatcaacttggtttggatgatccatcaaagattcggcttacatctcacaattgttat
tctcagcaacctaaaccgcagcctatcagatatcggggagtagaacatctactggacatg
cttgtccattataatcagacttctgatatcttgtattatgaggttctggacattccattg
ccagaattgcagtgtttgaaaacacttaaagttgcattccatcatgcaacaaaagatgag
gttgtagttcatagcataagacttccaaagaatagcaccatcagcgacgtgattactgac
ttgaaaaccaaggttgaactgtctaatcctgatgctgagctccgcttgcttgaagtattt
taccacaagatttataagatctttccacctcatgagaagatagagaacataaatgatcag
tactggacactacgggctgaggagatcccagaggaagagaagaatcttggcccacatgat
cgattgattcatgtttaccatttcatgaaagaccctaatcagaatcagcagattcagaat
tttggagatccttttttgatggttatccgtgaaggtgagactgctgctgaggtaatggag
cgcatccaaagaaaacttagagtccccgatgaggaattctccaagtggaagcttgcattc
atatccatgaaccggccagagtacctccaggatactgatgttgtatctgcacgttttcag
aggagagacgtatacggtgcttgggaacaataccttggcttggagcacactgatacaaca
tcgaaaaggtcttacacagccaatcagaatcgtcacacctatgagaagcctgtgaaaatt
tataattga
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integrated database retrieval system
