Setaria italica (foxtail millet): 101786062
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Entry
101786062 CDS
T02818
Name
(RefSeq) paired amphipathic helix protein Sin3-like 4 isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
sita
Setaria italica (foxtail millet)
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sita03036
]
101786062
Chromosome and associated proteins [BR:
sita03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
101786062
REST complex
101786062
Heterochromatin formation proteins
Other heterochromatin formation proteins
101786062
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAH
Sin3a_C
Sin3_corepress
DUF1722
Motif
Other DBs
NCBI-GeneID:
101786062
NCBI-ProteinID:
XP_004967968
UniProt:
A0A368R2L9
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All DBs
Position
V:complement(6330270..6339287)
Genome browser
AA seq
1442 aa
AA seq
DB search
MKRGARDDALMGSQLKRPNLARSDPAAQPQHMPLPGSASAAAPPPQAGAAPPAQSQQAAG
AASANQKLTTNDALVYLKAVKDKFQDKREKYEEFLEVMRDFKSERIDTNGVIIRVKTLFN
GYPELILGFNAFLPKGYAIKLQEEKKPVDFVEAINFVNKIKNRFQHDEQVYKAFLDILNM
YRKDNKSIQDVYQEVAQLFAEHKDLLEEFQHFLPDTSVAPQAVASSRGGLVKREDRGSLV
PPANRTLHGDKRDRAYLSHADRDFSVDRPDVEHDRQRRRLDKEKERKVERDRRDYEREDK
DGEHDSRELEIGQRKRKPFPRKMEDTAGAETHQGGPSENHGIHSISASSYDDKDALKSVY
THEFHFCEKVKEKLEHDAYQEFLKCLHIYSQEIITRSELKNLVNDILQHYPELMEGFNEF
LEHCENIDGFLAGVFNKRPTARIKTEDKEKDRERDREDRDRDREKEREKERERLDKGSTF
NSKEGASHKPSMFSGKEKYNLSKPISELDLSNCQRCTPSYRLLPKNYPMPPASNRTDLGA
SVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNAATKRVEELIE
KMQDNSVKPESPIRIDEHLTPLNLRCIERLYGDHGLDVMDVLRKNASVALPVILTRLKQK
QEEWSRCRSDFNKVWAEIYAKNYHKSLDHRSFYFKQQDTKNLSTKSLLTEIKEINEKKRK
EDDVLLAIAAGNRRPIVPNISFEYVDSEIHEDLHKIIKYSCGEVCNSSDQLDKVMRIWTT
FLEPILGVQPRTHGSEDPDLVKAKSRTAKTGLASVGESNTGAGIVAKQGNGDESEQGPSS
RARLANGVATDTQNGFHDADRTARRGEEPSNSALNGRLHSAAPAADETPSISAQNMASTE
RSAENLPAVRIEQQKANLELTPGVNASKSSHDAVETAGEGGRGGNETLPSAEGGETGRPG
SSVNGTNEGNKGRLNNEGSAAHNTSKVEREEGELSPNGDFEEDHFVPFEDGASKAKEGST
SKPFQGRPGEVVPSSEAAGENDADADDEGEESAQRSTEDSENASEAGEDASGSESGDGEE
CSREDHDEEEEDMDHDDQDAKAESEGEAEGTTETHDVEGGLSLPHSERFLHSVKPLAKHV
PTALHDRDEKSSRIFYGNDSFYVLFRLHQILYERLLSAKTNSFTAEKKWRTSKDTNPPNL
YAKFMTALYNLLDGSSDNTKFEDDCRAIIGTQSYVLFTLDKLIYKVVKQLQAIATDEMDN
KLLQLYLYEKSRSSGRFFDLVYHENARVLLHDESIYRFESCSNPTRLSIQLMEYGHEKPE
VTAVSIDPNFSSYLFSEYLCSMSDKKLSEGVYLGRNKRKHSNNDEPSDSLKAMDGIKVVN
GLECKISCKTSKVSYVLDTEDFLFRLRKRRKVLRGGNVPDRLQISKISAAKVQRFNRFLS
KP
NT seq
4329 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcggcgccagggacgacgcgctcatggggtcacagctcaagcgacccaacctc
gcccgatccgatccggcggcacagccgcagcacatgcctctgcccggttcagcgtcggcg
gccgcgccgccgcctcaggctggtgctgctccaccagcgcagtcgcagcaggcggcgggt
gctgcctcggccaaccagaagctgacgaccaacgacgcgctcgtctacctcaaggccgtc
aaggataagttccaggacaagcgggagaagtacgaggagttcctcgaggtcatgcgcgac
ttcaagagcgagaggatcgacaccaatggagtgattatacgtgtcaaaacccttttcaac
gggtaccctgagctgatccttgggttcaacgccttcctgcccaagggctatgcgatcaag
ctacaggaggagaagaagcctgtagattttgtggaagcaatcaattttgtgaacaagata
aagaatcggtttcagcatgatgagcaagtttacaaggcattcttggacattctcaacatg
taccgcaaggataataagtccatccaagacgtttaccaggaggttgctcagctgttcgct
gaacataaagatttgcttgaagaattccagcacttcctgcctgatacctcagtggctcca
caagcagtggcatcttcaaggggtggtttggttaagcgggaggacaggggctctctagtg
cctcctgccaataggacccttcacggtgataagagggacagagcttatctgtcacatgcc
gaccgtgacttcagtgttgaccgtcctgatgtggagcatgatcgccagagaagacgtctt
gataaagaaaaagaacggaaggttgaaagggatagaagagattatgagagagaagacaag
gatggtgaacatgacagcagagagctggagattggacagcgtaagcgaaagccttttcca
aggaagatggaggatactgcaggtgctgagacacaccaaggaggccccagtgagaatcat
ggaatacatagcatatctgcttcatcgtacgacgataaggatgcgctgaagagcgtatac
acacacgagttccatttctgtgagaaagtgaaggaaaagctggagcatgatgcttaccag
gagtttttgaaatgtctacacatctacagccaagagattatcacgagaagtgaactgaag
aacttggtgaatgatatactccaacattatccagaacttatggaagggtttaatgaattc
ttggagcattgtgaaaatatagatggatttcttgctggagtcttcaataaaaggccaact
gcaagaattaaaacggaggataaggagaaggatagagagcgggatagggaggacagggat
agagatcgggaaaaggaaagagaaaaggaaagagagagacttgataaaggatcaacattc
aattcaaaggaaggtgctagccacaaaccgtctatgttctctggcaaagagaagtacaac
ctgtcgaaaccgatttcagagcttgacctctcaaactgtcaacgatgcactcccagttac
cgtctcctacctaaaaactatcccatgcccccggccagcaacaggactgatcttggagcc
tctgttcttaatgatcactgggtatcagtgacatcaggaagtgaagattattcatttaag
cacatgaggaagaatcagtatgaagaaagcttgtttagatgcgaggatgacaggtttgag
ctcgatatgctgttggaatcagttaatgctgcgactaagcgggttgaagagttgatagaa
aagatgcaagacaactcagtaaaacctgagagtcctatacgcattgatgagcatttaact
cctttgaacctgaggtgcattgagcgattgtacggtgatcatggtctggatgtgatggat
gttcttcgcaaaaatgctagtgttgcattgccagttatcctaactaggctcaaacaaaag
caggaagagtggtcaaggtgccgatcagatttcaacaaagtttgggccgaaatatatgcc
aagaattaccacaagtcacttgaccatcgtagtttctatttcaagcagcaagatacgaag
aacctgagtacaaagtctctcctgacggagataaaagaaattaatgagaagaaaaggaag
gaagatgacgtactccttgccatcgctgctggcaataggcggcctatagttcccaatata
tcatttgagtatgtagactcagaaatccatgaagatctacataagatcatcaagtactcc
tgcggcgaagtctgcaattcttcggatcaattagataaagtgatgagaatatggacaact
tttctagagccaattttgggtgttcagcctcgaacgcatggttctgaggatccagaccta
gttaaggctaagagccgaacagcaaaaactggtcttgcaagtgttggggaaagtaatact
ggagcagggattgttgccaaacaaggcaatggcgatgaaagtgagcaaggaccgtcatcc
cgggctagattggcaaatggagttgcaacagacactcaaaatggtttccacgatgcagat
cgaactgctcgtagaggtgaggaaccatcaaactctgcattaaatggaagactgcacagt
gctgcacctgccgcagatgaaacaccttccataagtgcccaaaacatggcttctaccgag
cgatccgcagagaatttacctgctgttaggatcgaacaacagaaggctaatttggaactt
acgccaggtgtgaatgcttctaaaagttctcatgatgcagttgagacggctggtgaaggc
ggcaggggtggcaatgaaacattgccttctgcggagggaggggagacagggaggccggga
tcatctgtaaatggcaccaatgaaggaaacaaagggcgcctgaataatgaaggttctgca
gcccataatacttcaaaagttgaaagagaagagggtgaattatcaccgaatggagatttt
gaagaggaccattttgttccttttgaagatggagcatctaaagcaaaggaaggttccaca
agcaaaccgttccagggtaggcctggggaagtggtaccatcttctgaggcagccggcgag
aatgatgctgatgctgatgatgaaggcgaggaaagtgctcagaggtctactgaggacagt
gaaaatgcctcagaggctggtgaagatgcatcgggcagtgaatctggtgatggtgaggaa
tgctctcgggaagaccatgatgaggaagaagaggatatggatcatgatgatcaggatgcg
aaggctgaaagtgagggtgaggcagaaggaacaactgagacacatgacgtggaaggagga
ctatcactaccgcattcggaacgctttctgcactcagttaaaccacttgccaagcatgta
cctacagctttgcatgatcgagatgagaagtcctcacgtatattttatggaaatgattcg
ttttatgtcttgttcaggctacatcagatcttatatgagagactcctttcagcaaaaaca
aactcttttactgcggaaaagaaatggaggacttccaaggatacaaacccgcctaaccta
tatgcgaagtttatgactgcgctgtacaacttgctcgatggttcttctgacaacaccaag
tttgaggatgattgccgagctattattggaactcaatcatatgtactcttcactttagac
aaactgatttacaaagtggtgaagcagcttcaagcaatagcaacagacgaaatggacaat
aagcttctgcaactatatttatatgaaaaatcaagatcttctgggaggttctttgaccta
gtttatcatgaaaatgcccgtgtcttactccatgatgagagcatataccgttttgaaagt
tgctcaaatccgacaaggttgtctattcagctgatggaatatggtcacgaaaagccagaa
gtgaccgcagtatcaattgatccaaatttttcctcgtatctttttagcgagtatttgtgt
agtatgtcagataagaaattatctgaaggcgtctaccttggaaggaataaacgaaaacat
tcaaataacgatgaaccttcagattctttgaaggcaatggatggtatcaaagttgtaaat
ggtcttgaatgcaagatatcctgcaagacctctaaggtctcgtatgtccttgatactgaa
gatttcttgttccgtttgcggaaaaggagaaaagttttgcgtggtgggaatgtgcctgac
aggttgcagatttcaaaaatatctgctgcaaaagtgcagcgcttcaatagattcctatcc
aaaccatag
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integrated database retrieval system
