Shewanella japonica: SJ2017_0358
Help
Entry
SJ2017_0358 CDS
T04959
Name
(GenBank) ribonuclease PH
KO
K00989
ribonuclease PH [EC:
2.7.7.56
]
Organism
sja
Shewanella japonica
Brite
KEGG Orthology (KO) [BR:
sja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sja03016
]
SJ2017_0358
Enzymes [BR:
sja01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.56 tRNA nucleotidyltransferase
SJ2017_0358
Transfer RNA biogenesis [BR:
sja03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
SJ2017_0358
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-ProteinID:
ARD20704
LinkDB
All DBs
Position
399588..400301
Genome browser
AA seq
237 aa
AA seq
DB search
MRPSDRTPAQSRPVTITRQFTAHAEGSVLVEFGDTKVLCTASFEEGVPRFLKGQGQGWVT
AEYGMLPRSTHSRMQREAARGKQSGRTQEIQRLIGRSLRAAVDMKALGENTIVIDCDVIQ
ADGGTRTAAITGACVALVDALNWARGKGILKTNPLKFLIAAVSVGIYKGEPICDLEYIED
SAAETDMNVVMTETGKMIEIQGTAEGEPFSHEELLSLLELAKHGIREIVDTQKAALS
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgcgcccaagcgacagaacacctgcacaatctcgtccagttacgattactcgtcaattt
acagctcacgctgaaggttcggtgttggttgaatttggtgacactaaagttttgtgtacc
gcaagttttgaagaaggcgtaccgcgttttcttaaaggccaaggccaaggctgggtaact
gctgagtacggtatgcttcctcgttcgactcatagccgtatgcaacgtgaagctgcccgt
ggcaaacaatctggtcgtactcaagaaatccaacgtttaatcggtcgttctttacgtgct
gcagtagacatgaaagcgttaggtgagaacactatcgttatcgattgtgacgtgattcaa
gctgatggtggtactcgtactgctgcaattactggtgcatgtgttgcactagtagatgca
ttaaactgggcgcgcggtaaaggcattttaaaaactaacccacttaagttcttaattgca
gcagtgagcgttggtatttataaaggtgagccaatctgcgatttagaatacatcgaagac
agcgcggctgaaaccgacatgaacgtagttatgactgaaactggcaagatgattgaaatc
caaggcactgccgaaggtgagccgttcagccacgaagagttattaagcttacttgagctt
gctaagcatggtattcgcgaaatcgtggatacgcaaaaagcagcattaagctaa
DBGET
integrated database retrieval system
