Shewanella japonica: SJ2017_1814
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Entry
SJ2017_1814 CDS
T04959
Name
(GenBank) Xylan 1,4-beta-xylosidase
KO
K01198
xylan 1,4-beta-xylosidase [EC:
3.2.1.37
]
Organism
sja
Shewanella japonica
Pathway
sja00520
Amino sugar and nucleotide sugar metabolism
sja01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sja00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
SJ2017_1814
Enzymes [BR:
sja01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.37 xylan 1,4-beta-xylosidase
SJ2017_1814
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_43
GH43_C2
Glyco_hydro_32N
DUF1349
Motif
Other DBs
NCBI-ProteinID:
ARD22122
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Position
2171788..2173395
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AA seq
535 aa
AA seq
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MNLPDINPILPGFNPDPSIVRVNDDYYIAVSTFEWYPGVQIYHSTDLVNWTLVHRPLNRA
DLLDMTGVPDSCGIWAPCLTHNNGKFYLIYTNVKRFDGNFKDSPNYLTTCETIDGEWTRP
VYLNSSGFDPSLFHDDDGKKWLLNMVWDYRPDRSFFGGIALQQYCDKTERLIGESKIIFT
GTEFGLTEGPHLYKKNGYYYLLTAEGGTGYEHVCTMARSKHIDGPYDVDPQGPIVATVPH
LQHKLQRNGHGSLVESKEGEWYLAHLTSRPLDIEQPTSQRSSPMGRETAIESVQYTDDGW
FRLATNSSLAQLNPIGLTAKPQRDFSFRDEFTDRFIADQFQWLRSPTPENFVSTTRKPGS
LLLTGMHSLGSTFEQALVATRQRHFSFVAQTKIMFESNHFQQTAGLICYYNAHKFHYLYL
SYDEKIGLNLDIMSCEGEQSLDLVFPIFEQRIPLLQSSVYLRADVHYETLKFEYSLNGSD
WFHIASLDYSLISDEAGKGEGSSFTGAFVGLCAQDLTGQNTVAEFSYFDYKERHQ
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgaatttacccgatattaatcccatactgccagggtttaatccagatccaagcattgta
cgtgtgaatgatgattactatatcgctgtatcaacatttgagtggtatccaggggtacaa
atctatcattcaacagatttggttaattggaccttagtccatcgaccgttaaatcgagct
gatttattagatatgactggtgtcccagactcatgtggtatatgggcaccatgtcttaca
cacaataatggtaagttttatcttatttataccaacgtcaaacgatttgatggcaacttt
aaagattcacctaattatttaactacctgtgaaacaatcgatggagagtggactcgtccg
gtttatctcaatagtagtggctttgatccatctttatttcacgatgacgatgggaaaaag
tggctattgaatatggtttgggattatcggccagatagaagtttcttcggtggtatcgct
ttacaacaatattgcgataaaacagaaagattaattggcgagtcgaaaattatttttacg
ggtacagagttcgggttaactgaagggcctcatttatataaaaaaaatggttactattat
ttattaactgctgagggggggactgggtacgaacatgtttgtactatggcccgttcaaaa
catatcgatggcccttatgacgttgatcctcaaggtcctattgtagcaacggttcctcat
ttacagcacaaattgcaacgtaatggtcatggtagcttagtagaaagtaaagaaggggaa
tggtatttagctcatctgacttctagaccacttgatattgaacaacctacatcacagcgt
agcagtcctatgggcagagaaacagcaatagaatctgttcaatataccgatgatggttgg
tttaggttagcgactaactcatcgctggcacaattaaatccaattggattaacagctaaa
ccgcagcgagatttctcgtttagagatgaattcacagatagatttatcgcggatcaattt
caatggcttagaagtccaacccctgaaaactttgtaagcacaacccgtaaaccaggtagc
ttattgctgacaggaatgcattcattaggtagcacatttgagcaagcgttggttgcgaca
aggcagcgtcatttttcatttgttgctcaaaccaaaatcatgtttgaatctaaccacttt
cagcaaaccgcaggattaatttgttattacaacgctcataaatttcattatttatattta
tcttatgatgaaaaaattgggctaaacctagatattatgagctgtgaaggtgagcaaagt
ttagatcttgtatttccaatatttgaacagcgtattcccttgttacaatcatcggtttat
ctacgagcagatgtgcactatgaaacacttaaatttgaatactcattaaatggatctgac
tggtttcacattgcgtctttagattacagtttaatttctgatgaagcaggcaaaggagaa
ggttccagttttactggtgcatttgttggtttatgtgctcaagatttaactgggcaaaac
acagttgcagagtttagttactttgactacaaagaacgccatcaatag
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