Shewanella japonica: SJ2017_2094
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Entry
SJ2017_2094 CDS
T04959
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sja
Shewanella japonica
Brite
KEGG Orthology (KO) [BR:
sja00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sja02000
]
SJ2017_2094
Transporters [BR:
sja02000
]
Other transporters
Pores ion channels [TC:
1
]
SJ2017_2094
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plug
MipA
OMP_b-brl_3
Autotransporter
OMP_b-brl
Motif
Other DBs
NCBI-ProteinID:
ARD22392
LinkDB
All DBs
Position
complement(2508632..2510626)
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AA seq
664 aa
AA seq
DB search
MKFNTSILAALIAATLTPNLAIADHTTKTCDGEQCDDYIVVTGELMKEPSKVTTDPKKPR
LPLPAYDGAGFLKTIPGFSISRKGGAGGDPSLRGMGGSRVSIVDDGQHVYGTCGGRMDPP
TAYIYPEAYDAITVIKGPQTVKYGPVGSAGTVLFEKERHSFVEKDMEGRLSMTGGSFGRE
DYLVEMKAGTETHYIDFDMNKSKSDHYEDGDGNTIQSSYDRSNVNVALGWTPDEDTVVEL
AYGSSSGEAEYADRANKARQIDNENLTLLAKRDVNSTWLNNVEFQFYSNENDHIMDQFDQ
GVNAGTNVRRETTGGHLWLDLALSDKWEILIGIDYMDSAHEGRSIDKELDNGLDDLLAKP
FNKNMSYENIGVFVEANYDISYATSQGKILTGLRLDQWDTELHVGQKGQREDDLVSGFIR
YEHMSGHSQYYAGIGRAERIPDYWEFMKADDSNMAIKAFDLEPERTTQLDVGWIYQNDYE
ISTAFYYGKVDDYILIDSNGAKTSAYNVDATIWGGELGVMYPFNEQWSAQTTVSYSHGDN
DTADTPLGQISPLEGRLSVNYESNNWTAGLFWRLVAAQDRVAVGQGNISGQDLGESSGFG
TLSVNGSWKHDDLLVSFGVENLFDLTYAEHISRSGAGNDIPGSEPLFQVNEPGRTAWVKV
DYTF
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttaatacttcaattttagctgcgctgattgcggcaacattaacgccaaacttg
gcaatagcagatcatactacaaagacctgtgatggcgagcaatgcgatgattatatcgtt
gtcacgggtgaattaatgaaagagccatctaaggttactaccgatccaaagaaacctcgc
ttacctttacctgcatacgatggcgcaggtttcttgaaaacgataccaggctttagcatt
agtcgtaagggcggcgctggtggcgacccttctttgcgaggaatggggggatcacgggtc
agtattgttgatgatggccaacatgtttacggtacctgcggtggccgtatggatcctcca
accgcatatatttatcctgaagcctatgacgccattactgtcattaaaggaccgcaaacg
gttaaatatggtccagtgggctcagccggaaccgttttatttgaaaaagagcgccatagc
tttgtagaaaaagacatggaaggccgattgagtatgacaggcggcagctttggccgagaa
gactatttggttgaaatgaaagccggcactgagacgcattatattgactttgatatgaat
aaatccaaaagcgatcactatgaagatggcgatggaaacacaatacaatcaagttatgat
cgcagtaatgtcaatgtggcgcttggatggacaccagatgaagataccgttgttgaattg
gcctatggcagttcaagtggtgaagctgaatatgcagacagagcaaataaagcacgccaa
attgacaatgaaaacttaacgcttttggcgaaacgagacgttaactcaacatggttaaac
aacgtcgaatttcaattttattccaatgaaaacgatcacatcatggatcaatttgatcaa
ggagtaaatgctggtaccaatgtgcgccgtgagaccacaggagggcatctttggttggat
ctagcgttgagtgataagtgggaaatcctaatcggtatcgattatatggacagtgcgcat
gaaggcagaagcatagacaaagagttggataatggccttgatgatctattggctaagcct
tttaacaaaaacatgagctatgagaatatcggcgtgtttgttgaagccaattacgatatc
agttatgcgacaagccaagggaaaattttaacagggttgagattggatcaatgggatacc
gagttacatgtgggccaaaaaggtcagcgagaggatgatcttgtcagtggttttattcgt
tacgagcacatgtctggtcacagtcagtactatgcaggtattggccgtgctgagcgcatt
cctgattactgggagtttatgaaagctgatgatagcaatatggccattaaggcatttgat
ttagaacctgaaagaacgacccagcttgatgtcggttggatatatcaaaatgattatgaa
atctcgacggcattttattatggcaaggtcgacgattatattttaattgattcaaatggg
gctaaaacatctgcctacaatgttgatgcgaccatttggggtggtgaacttggtgtaatg
tacccctttaatgaacaatggtctgcacaaacgacggttagctacagccatggcgacaat
gacaccgccgatacacctcttggacaaatctcgccattagaagggcgtttatcagttaac
tatgaatcgaataattggactgctggactattttggcgtcttgttgcagcgcaagataga
gttgcagtaggacaaggcaatatatcgggccaagatttgggtgaaagtagtggctttggc
accttgtcggtaaatggatcatggaagcatgatgacctattagtcagctttggtgttgag
aacctgtttgatctaacctacgcagaacatattagtcgttcaggtgcaggcaatgatatt
cctggcagtgaaccattgtttcaagttaatgaaccaggtcggacagcttgggttaaagtg
gattacactttttaa
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