Shewanella japonica: SJ2017_3069
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Entry
SJ2017_3069 CDS
T04959
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sja
Shewanella japonica
Brite
KEGG Orthology (KO) [BR:
sja00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sja02000
]
SJ2017_3069
Transporters [BR:
sja02000
]
Other transporters
Pores ion channels [TC:
1
]
SJ2017_3069
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec
Plug
Motif
Other DBs
NCBI-ProteinID:
ARD23342
LinkDB
All DBs
Position
complement(3628317..3631289)
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AA seq
990 aa
AA seq
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MFNCKPSVLSLALAAAGVSIMLTPNDAFAADEIKTETVQSSTADVEVSATENTQPTNALA
SNEADDTEAETGIERISVKGYSRSLIDSLNSKRYGDTVSEQLSADDLGALPDVSMADALT
RLPGISAVRTGGQAAEINIRGMSGGFVFSTLNGREQVSTSGSRSIEFDQYPSELISSAAV
YKSPKASLIEGGVAGTVELTTVSPLSKDKQHNFTANVRGMYNDRADEVYGAEDFGSRLSF
SYQGKFLEDTLGVAVGYARLEQPSVATQFIGLAYNDSKDVDGIEGDTNGPEDNPANEYIS
EGFEVQHLGGVEIRNGYMAAIEWAPVDNFVLKADAFMSRFDSESFARGFRTKFGGRDASV
SNPTYDGNSVIGGTFNRTSKSYTRVEIVNDDNQDFDEVDSFGINGDWQVTDRLNVNVDVS
LSAAKSDFRNGLLWSNVAVDANADAPIFDENVSVSYLLNGLDLPDVGFNQADAFSDIDRV
MVSKYGIYPFENEDEVKAYRVDFTYELDNDFIASVEFGARYSDRTYSNDRSVFEYGNDGA
FSKSEPPLKLTDDMTTVVDWDGDFSYFPSYLAIDLDKALNAWFPDGTPQPVQTWGNAGGV
IDPQGYTTNYSWSVLQSGEVYEEVLSGYVMANIDTEIGGLPITGNFGVRVVNTDQSATML
QNVEGDPTLGAQNITDEIGIINQNYAPTVQGVDYTDYLPSINLNFKVTDDSQVRFAAAKV
MSRPPINRLAGDISASVSDDGEINGSSTNNPFLMPFYADQYDLSYEYYFDEGAVVAAVFY
KNIDSFIDTIAIDNFDFKGNGFNVPDYIIDEDSGEQIETTNGTYTTAVNNAEGGYIRGLE
LAYTQVFASLPAGWSGLGFNASYSYTESEVQSITNLGGDTATQDLPGLSNNVVSATLFYS
YEGFETRLSGRYRDDFVSEQVAINEQVVNFDGETVLDYQASYQVTDGLGVLFQVNNLTDE
PTKSYFGTENKTGTIQYFGREFYLGFTYAM
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atgttcaattgtaaacctagtgtgttatcactagcgctagcagcggcaggagtcagtatt
atgttgactcctaatgacgcatttgcggccgatgagataaaaactgaaacggttcaatca
tcgacagctgatgtcgaagtgagtgccacagagaatacacaacccacaaatgcgttagct
agcaatgaagcggatgatacggaagctgaaactggcatcgagcggatcagtgtgaaaggc
tatagtcgtagtttgattgattcacttaactcaaaacgttatggggataccgtttctgag
caattatctgccgatgacttaggtgcactacctgacgtttcaatggccgatgcattgacc
cgtttacctggtatttctgcagtacgtactggtggtcaagccgctgaaattaacattcgt
ggtatgtcgggtggctttgttttttcaaccttaaatggacgtgaacaagtatcaacgagc
ggttctcgtagtattgagtttgaccaatacccttctgaattaattagttctgcagcggtt
tacaagtcgcctaaagcttcccttattgaaggcggtgttgcgggtactgttgagctgaca
accgtcagtcctctaagcaaagataaacaacataactttactgccaatgtacgtggtatg
tataacgatcgtgccgatgaagtgtacggtgccgaagattttggttctcgtttaagtttt
tcatatcaaggtaaattcctagaggataccttaggtgtggcagtgggttacgctcgtctt
gaacagccgagtgtcgcaactcaatttattggccttgcttacaatgattccaaggatgtc
gacggcattgaaggggataccaatggacctgaagataaccctgcgaacgaatacatcagt
gaaggttttgaggtacaacatctaggtggtgttgaaattcgaaatggttacatggccgcc
attgagtgggcaccagtagacaattttgtgttaaaggctgatgcctttatgtcccgcttt
gacagcgaatcatttgctcgtggttttcgtaccaagtttggcggccgcgatgccagtgtt
tcaaatccaacttatgatggtaattcagttatcggcggcacgtttaaccgcacttctaaa
agctacactcgtgtcgaaatcgtcaatgatgataaccaagattttgatgaggtcgacagc
tttggtatcaatggtgattggcaggtaacagacagattaaacgtcaatgtcgatgtgtcg
ttatcagcggctaaaagtgatttcagaaacggcttactttggtcaaatgtcgctgttgat
gcgaatgcggatgcgcctatttttgatgagaatgtctcagtaagttatttattaaatggt
ttagatttacccgatgttggctttaatcaagcggatgcattttctgatatcgaccgagtg
atggtcagtaaatacggtatttatccgtttgaaaacgaagatgaagtgaaagcataccga
gtagattttacttatgagttagataatgactttatcgcaagtgtagaatttggcgcacgc
tattcagatcgcacttactcaaacgatcgctcagtatttgaatacggtaatgatggtgca
ttttcaaaatctgagccgccactcaaacttaccgatgatatgacaacggttgttgactgg
gatggtgacttttcatatttcccttcttatttagccattgatttagataaagcgttaaat
gcatggttcccagatggcacgccacaacctgtacaaacttggggtaatgcgggtggagtc
atcgatccacaaggctacacaactaactattcttggtcagtgctgcaaagtggcgaggtg
tatgaagaagtcttgtctggctatgtcatggcaaacattgatactgaaattggtggatta
ccaattacgggtaactttggtgttcgtgtggttaataccgaccagtcagcgaccatgctt
caaaatgtagaaggagatccgactttaggtgcgcagaatattactgatgaaattggcatt
atcaaccaaaactatgcgccaacggttcagggggttgattacaccgattacctgccttct
atcaacttaaactttaaagtcactgatgactcacaggtccgttttgccgctgcaaaagtg
atgtctcgcccaccgattaatcgcttagctggcgatatcagtgcatcggtttcagatgat
ggtgaaatcaatggttcaagtaccaataacccattcttaatgccgttctatgcagatcaa
tacgatttatcttatgagtattactttgatgaaggggcagtcgtcgctgctgtcttctat
aagaatattgactcattcattgacacgattgcgattgataacttcgactttaaaggtaac
ggttttaacgtccctgattacattattgatgaagatagtggtgagcaaattgaaaccact
aacggtacttacaccacagcagtcaataacgctgaaggcggctatattcgtggtcttgaa
ttagcttacacccaagtgtttgcttcactaccagcaggatggtcagggctagggtttaac
gcaagttactcttacaccgagtctgaagtgcaatccattactaacttaggtggtgacacg
gcaacgcaagatttacctgggttatctaacaatgtggtcagcgccacgctcttttactct
tacgaaggcttcgaaactcgtttaagtggtcgttaccgtgatgatttcgtatctgagcaa
gtcgccattaacgaacaagtggtgaattttgatggtgaaacagtgcttgattatcaagcg
tcttaccaagtgactgatggcttaggagtgttatttcaagtgaataacttaactgatgag
ccaactaaaagttacttcggcactgaaaacaaaaccggcaccattcagtactttggccgc
gaattttacttggggttcacttatgccatgtaa
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