Salimicrobium jeotgali: AAV35_004635
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Entry
AAV35_004635 CDS
T04359
Name
(GenBank) hypothetical protein
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
sje
Salimicrobium jeotgali
Pathway
sje03030
DNA replication
sje03430
Mismatch repair
sje03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sje00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AAV35_004635
03430 Mismatch repair
AAV35_004635
03440 Homologous recombination
AAV35_004635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sje03032
]
AAV35_004635
03400 DNA repair and recombination proteins [BR:
sje03400
]
AAV35_004635
Enzymes [BR:
sje01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AAV35_004635
DNA replication proteins [BR:
sje03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AAV35_004635
DNA repair and recombination proteins [BR:
sje03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AAV35_004635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
tRNA_anti-codon
tRNA_anti_2
POT1
Motif
Other DBs
NCBI-ProteinID:
AKG04137
UniProt:
K2G6X4
LinkDB
All DBs
Position
936588..939887
Genome browser
AA seq
1099 aa
AA seq
DB search
MGFTHIGIKSGYSLMNSTIDIHELIDEAYGRGIKALGLVDEKNISAWLSFYNACIEKNIT
PILGVELPVIHKGEEYPTFLLATSEQGAGNVIEITSRYHLDGRVELNGIEELGNDVIAIW
KTGDTPVAQQVTENRKEEVIPVYREFESVFSLMFAGVRAAELRQEQMLHDPLKAWAQAGL
ISCTAISDVHFLKEEDRTAYEVMQAMEAGEAFKAGTSSPGVTCLEDPSRTESYFSEWPEV
IRNNETIVDKSSVSLTRSRSLLPSYPLEDGDSNEYLRELCEQALPEKYGADTGEAKKRLE
HELEVITSRKFSDYFLIVWDFVKYAKDKGIKVGPGRGSAAGSIVAYLLNITTVDPLKYGL
LFERFLNPERQTMPDIDIDFSDHRRDEVITYVREKYGKERVAQICTFGTFAARSTIREVG
KALKVEEEDIAYILKQFPGNRSLNLEQIVKQSEPLKEFIRSSGQLQSLFRIGTRIEGLPR
HVSTHAAGVVISDYPLGRYTGMMDHDGPALLTQMAMEDVEASGLLKMDFLGLRNLSFLEN
MEKNIRKYADSAFSIQSIPEDDETTYRQLSEGKTNGIFQLESRGMRKVLQQLKPERFEDI
VAVNALYRPGPMDFIPDYVERKHGRTPVTYLHADIEPILEETYGVLLYQEQIMKVAQIVA
GYSLGEADLFRRAVSKKQESILKNEESRFLKGAEQAGYKEEVARELFRWIVKFSNYGFNK
SHAVAYSIISYKLAYIKTHFPEYFLSELINSAVGDKEKIANYVREAKQEGIPVHPPFVNE
AFPHTSVRKGNIILGFMMIKGIGFKMGRSITEERQRGRFTNFFEFTMRGSSYLDRNSMEN
LIKAGCFDRLHSNRASLLASIDQALEQSELFREFQEDIGFITEWSGGLVHKDPLPALTRL
NLEKEVLGAVLSSHPLEGAGKSLKRNNIELLSAALMKEKGFITVAAVVDNVREIRTKRGE
KMAFLSLSDDKEEMDAVVFPETYRTCSSWLDEDMIVVIGGKIQERRGEKQLQAQSIRPVQ
ETSEIFIKTEKKRYTEVLEFMKTLARDHPGEQEIFLYIEEVKKVYKMPSGYGIDVSEEVR
KRLEKNIGNEKYAIRHRWL
NT seq
3300 nt
NT seq
+upstream
nt +downstream
nt
atggggtttactcacataggtataaaaagcgggtacagtcttatgaacagtaccattgat
atacatgaactcatagacgaagcttacggccgggggataaaagcgctcggtctggtcgat
gaaaaaaatatcagtgcctggctgtcgttttataatgcctgtatagaaaaaaacataact
cctatcctcggcgtcgaactcccggtgatacataaaggagaggagtatccgacttttctg
cttgccacctcggaacagggggcaggaaacgtaatcgaaatcacaagcaggtaccatctg
gacggtcgagtggaactgaacggtatcgaagaacttgggaacgatgtaatcgcgatatgg
aaaacgggagacacccctgtagcgcaacaggttacggaaaacagaaaagaagaagtcatc
cccgtatatcgggagttcgaatccgtcttttctttaatgttcgcaggcgtccgtgctgca
gaactgcgacaggaacagatgcttcatgaccctctgaaggcgtgggcgcaggcaggactg
atcagctgtacagccatcagtgacgtacattttctgaaagaagaggatagaacagcctat
gaagttatgcaggcgatggaggcaggcgaagcttttaaagcagggacttcttcccctgga
gtaacttgtctcgaagatccttcccggacagagtcatatttcagtgaatggcccgaggtc
atcaggaataacgaaacaatagtagacaaaagttctgtttctctaacccgctcccgttct
cttctcccttcctaccccctggaggatggggacagtaatgaatatttaagggaattgtgt
gagcaggcgttgccggagaagtacggcgctgataccggggaagcaaagaaacggctggaa
catgagcttgaagtgattacctcccgtaaattcagcgactacttccttattgtgtgggac
ttcgtcaaatatgcgaaggacaaggggattaaagtcggtcccggccgtggttccgctgcc
gggtcgatcgtagcatatctgttgaatataacgactgtggaccctttgaaatacggtctc
ctttttgaaaggtttctcaatccggaacgtcagaccatgcccgatatcgacattgacttt
tccgatcaccggcgtgatgaagtgattacatatgtacgggaaaaatacggaaaagaaaga
gtggcccaaatttgtactttcggtacattcgcagcgaggagtacgatacgggaggtagga
aaagcgctgaaagtggaagaagaggatattgcgtatatactgaagcagtttcccggaaac
cgttcgctcaacctggaacagattgtaaaacagtcggaacctcttaaggagtttataaga
agttccggtcaacttcagtctctgttcagaatcggcaccagaatcgaaggactgccaaga
cacgtctccactcacgcggctggtgtagttatcagcgactatcctctcggtagatatacc
gggatgatggatcacgatggtccggcactgcttactcagatggctatggaggacgtggag
gcttccggtcttctcaaaatggattttctcggactcaggaatctgtcttttcttgaaaac
atggaaaagaacatcagaaaatacgccgattccgcattttcaatccagagcattccagag
gatgatgaaactacctacagacaattgtcggaaggaaagacgaacgggattttccagctg
gagtccagaggaatgaggaaagtactgcaacagttgaagcctgaacgttttgaagatatc
gtcgccgtcaatgccctttatcgtcccggaccgatggatttcattccggattatgtggag
cgaaaacacggcaggacccctgtcacttatttacacgcggacattgaaccgattctcgag
gagacatacggggtgcttttgtaccaggaacaaataatgaaggtcgctcagattgttgcc
gggtattctctcggggaagcggatcttttcagaagggcagtgagcaaaaaacaggaaagt
attctcaaaaatgaggagagccgatttctgaaaggcgctgaacaggctggttataaggaa
gaagtggcgcgggagctgttcagatggattgtgaaattctccaattatggattcaacaaa
agccacgcagtagcctacagcatcatttcgtataaacttgcttatattaaaacgcatttt
ccggaatacttcctttccgaactgatcaacagcgccgtaggagataaagagaaaatagcg
aattacgtacgtgaagcaaagcaggaaggtatacccgtacatcccccgttcgtaaatgag
gcttttcctcatacatctgtccgaaaaggaaatatcatcctcggcttcatgatgataaaa
ggtatcggtttcaagatgggccgttccattacggaagagaggcagcggggacgctttacg
aattttttcgagttcacgatgagggggtcttcctacctggatcggaactcgatggaaaac
ctcattaaggccggctgttttgaccgtcttcactccaaccgcgcaagtttacttgcgagt
atcgatcaggcgctggaacaaagtgaactgttcagggaatttcaggaagatatagggttc
attacggaatggagcggaggtctcgtccacaaagacccgcttccagccctcacacggctg
aatttggaaaaagaggtgctcggagctgtcctttcttcccatcctctggaaggggcgggc
aaaagtctgaaaagaaacaatatagaattactcagcgcggccctgatgaaagaaaaaggg
ttcattaccgtagccgccgtcgtagataacgtcagagagatacggacgaaacggggagag
aaaatggcttttctttcattgagtgacgataaagaagagatggacgcagtggtgtttccc
gaaacgtaccgtacctgcagctcctggctggacgaggacatgattgtagtaatcggcggg
aaaatacaggaacggcggggagagaaacagcttcaggcacaaagtatacgtcctgtgcag
gagacgagtgaaatcttcattaagacagaaaaaaagcggtatacggaagttctcgaattt
atgaaaaccctggcccgtgatcatccgggagaacaggaaatatttctctatatcgaagaa
gtgaagaaagtctataaaatgccttccggctacgggattgatgtgagtgaagaagtacgg
aagcgtttggaaaagaatatcggaaatgaaaaatatgctataaggcacagatggctctga
DBGET
integrated database retrieval system
