Streptomyces janthinus: RI060_02385
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Entry
RI060_02385 CDS
T09385
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
sjn
Streptomyces janthinus
Pathway
sjn00521
Streptomycin biosynthesis
sjn00523
Polyketide sugar unit biosynthesis
sjn00541
O-Antigen nucleotide sugar biosynthesis
sjn01100
Metabolic pathways
sjn01110
Biosynthesis of secondary metabolites
sjn01250
Biosynthesis of nucleotide sugars
Module
sjn_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
sjn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
RI060_02385 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
RI060_02385 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
RI060_02385 (rfbC)
Enzymes [BR:
sjn01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
RI060_02385 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
DUF4913
Motif
Other DBs
NCBI-ProteinID:
WND16269
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Position
480203..480811
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AA seq
202 aa
AA seq
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MRPLGIEGAWILEPKIFPDDRGSFHEWYRGEEFREATGHDLALAQANCSVSRRGVLRGVH
FADVPPSQAKYVTCVRGAVLDVVIDIRVGSPTYGQWEAERLDDDTRHAVFLAEGLGHAFM
ALTDDATVVYLCSTGYAPEREHGIHPLDPALGIAWPEGITPLLSPKDEQAPTLAEAERQG
LLPSYETCRAYYEELRAGRGDG
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgcgaccactggggatagagggcgcctggattctggagcccaagatctttccggacgac
cgcggcagcttccacgagtggtaccgcggcgaggagttccgtgaggccacgggccacgat
ctggcgctggcccaggccaactgctcggtctcccggcggggcgtgctgcgtggtgtgcac
ttcgccgatgtgccgcccagccaggccaagtacgtcacgtgtgtgcgcggcgccgtcctg
gacgtggtgatcgacatccgggtgggctcccccacctacggccagtgggaggccgaacga
ctcgacgacgacacccgccacgcggtgttcctcgccgaggggctgggccacgcgttcatg
gcactcaccgacgacgccacggtggtctatctgtgctccaccggctacgccccggagcgc
gaacacggcatccaccccctcgacccggctctcggcatcgcctggcccgagggcatcacc
cctctcctctccccgaaggacgaacaggccccgaccctggccgaggcggaacgccagggt
ctgctcccgtcgtacgagacctgccgtgcgtactacgaggaactgcgggccggtcgggga
gacggctga
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