Scomber japonicus (chub mackerel): 128354838
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Entry
128354838 CDS
T09718
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like
KO
K12006
tripartite motif-containing protein 16
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sjo04121
]
128354838
Ubiquitin system [BR:
sjo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
128354838
BRITE hierarchy
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
zf-RING_10
Prok-RING_4
TRAF3_RING
MRP-S31
ApoLp-III
U-box
UvrD-helicase
RSS_P20
Motif
Other DBs
NCBI-GeneID:
128354838
NCBI-ProteinID:
XP_053170959
LinkDB
All DBs
Position
Unknown
AA seq
555 aa
AA seq
DB search
MAQRDQLDRESFSCVICLDLLKDPVTTSCGHSYCMSCIKGFWDGEDQRNIYSCPQCREAF
TPRPVLKKNTMLAALVEQLKKTGLQAAPADHCYAGPEDVACDVCTGRKLKAFKSCLVCLA
SYCENHLQSHYESPTFKKHKLVEPSKKLQENICSRHDEAMKIFCRTDKKSICYLCTMEDH
KGHDTVPAAAERTERQRELEVSRLNIQQRIQDREKDVKLLQQEVEAVSHSADKAVKDSGK
IFTELIRLLQKRSSDVKQQIRSQQETEVSGVKELQEKLQQEITELKRKDAELKQLSHTED
HNQFLQNYPSVSQLSEPTDSSSINIRPLRYFEDVTAAVSELRDKLQDILRDKWTNISLAV
TEVDVLLPQPPKTRAEFLKYSCEITLDPNTANTELLLSEGNRKVKFTEQQQSYSSHTDRF
TDDPQVLSRESLTGRCYWEVEWSGGGWGVDVAVAYKNISRAGDESLFGYNDKSWALWCET
NSYEFYFNSIETHVSGPGSSRVGVYLDHRAGILSFYSVSETMTLLHRVQTTFTQPLYAGL
YVGGFGSTAELCKVK
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagagagatcagctggaccgagaatccttctcttgtgtgatctgtctggatcta
ctgaaggatccggtgactacttcctgtggacacagctactgtatgagctgtattaaagga
ttctgggatggagaggatcagaggaatatctacagctgccctcagtgcagagaggccttc
acaccgaggcctgtcctgaagaaaaacaccatgttagcagctttagtggagcagctgaag
aagactggactccaagctgctcctgctgatcactgctatgctggacctgaagatgtggcc
tgtgatgtctgcactgggaggaagctgaaagccttcaagtcctgtctggtgtgtctggcc
tcttactgtgagaatcacctccagtctcactatgaatcacctacatttaaaaaacacaaa
ctggtggagccctccaagaagctccaggagaacatctgctctcgtcatgatgaggcgatg
aagatattctgccgtacagataagaagagtatctgttatctgtgcactatggaggatcat
aaaggccacgacacagtcccagctgcagcagaaaggactgagaggcagagagagctcgag
gtgagtcgactaaacatccagcagagaatccaggacagagagaaagatgtgaagctgctt
caacaggaggtggaggccgtcagtcactctgctgataaagcagtgaaggacagtgggaag
atcttcactgagctgatccgtctcctccagaaaagaagctctgatgtgaagcagcagatc
agatcccagcaggaaactgaagtgagtggagtcaaagagcttcaggagaagctgcagcag
gagatcactgagctgaagaggaaagacgctgaactgaagcagctctcacacacagaggat
cacaaccagtttctacaaaactacccctcagtgtcacaactcagtgaacctacagactca
tccagcatcaatatccgtcctctgagatactttgaggatgtgacagcagctgtgtcagag
ctcagagataaactacaggacatcctgagggacaaatggacaaacatctcactggcagtg
actgaagtggacgttttactgccacaaccacccaagaccagagctgagttcttaaaatat
tcatgtgaaatcactctggatccaaacacagcaaacacagagctgttattatctgaaggg
aacagaaaagtaaaatttacagaacaacaacagtcttattctagtcacacagacagattc
actgatgatcctcaggtcctgagtagagagagtctgactggacgttgttactgggaggtg
gagtggagcggaggaggttggggagttgatgtagcagttgcatacaagaatatcagcaga
gcaggagatgaatctctatttggatataatgacaaatcttgggctttatggtgtgagact
aacagttatgaattttacttcaacagcattgaaactcacgtctcaggtcctggttcctcc
agagtcggagtgtacctggatcacagagcaggtattctgtccttctacagcgtctctgaa
accatgactctcctccacagagtccagaccacattcactcagcctctctatgctggactt
tatgttggtggttttggatccacagctgagttgtgtaaagtgaaatag
DBGET
integrated database retrieval system
