Scomber japonicus (chub mackerel): 128358438
Help
Entry
128358438 CDS
T09718
Name
(RefSeq) uncharacterized protein zgc:136858 isoform X1
KO
K16330
pseudouridylate synthase / pseudouridine kinase [EC:
4.2.1.70
2.7.1.83
]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo00240
Pyrimidine metabolism
sjo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
128358438
Enzymes [BR:
sjo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.83 pseudouridine kinase
128358438
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
128358438
BRITE hierarchy
Motif
Pfam:
Indigoidine_A
PfkB
Motif
Other DBs
NCBI-GeneID:
128358438
NCBI-ProteinID:
XP_053174690
LinkDB
All DBs
Position
5:complement(13654587..13660387)
Genome browser
AA seq
734 aa
AA seq
DB search
MAELDLCLAVTENTLQGLMQLGSLFDFSFKKLRFPLKSEENDEESLCAHVRPRNFNISKQ
IVQKCFFRVHPSVSQALAENRPVVALESTIITHGMPYPHNLSTAKEVEAIVRAEEAIPAT
VGVIDGKVHVGLSSEELDYLARYKSSMKVSRRDLPYVISKGLSGGTTVSATMIAAHRAGI
PVFVTGGIGGVHRDGENSLDISADLTELGRTPITVVSAGVKSILDIGRTLEFLETQGVCV
ATYGTSKSFPAFFSPQSGFTSPYQVCNPEEAAKLISSTLSLGLQSGILLAVPIPEEHAAA
GQQIEEAIQTAVTEASAKGITGRDVTPFILQKVNELTDGKSLQANIALIRNNTKVGSQIA
CALSKQTNKRKLRSTLDHGKKSESDIVVVGGINVDFIAKGKTKTLLFGQTNAGSVCQSFG
GVGRNIADSLSRLGHKPLFISATGADSHSDAVLNYCKHMNTSGVARLQDQHTATYCAVIT
ESGELSLGLGDMDVHQQITEHYVSQFEKQLSSATLVCLDGNIPTSTIDYVCSVAKKYNIN
VWYEPTDSEKACKPFLSDAWKSLSYSSPNLAELCTMNQTLGIQTPEVLPSSLEEVLSVAV
ALSRPLLEHLHCLVVTLGAHGVLLCGEHDSGSVNLQPRKEKKMRKLCANHYPALTVTAEE
TMNVSGAGDSLAGALIAGILQGQKTDSCVRMGLLAARLSLASPHPINPMLTLASVDPSDI
QTQNWPKPSFMWID
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atggctgaattggacttgtgccttgcagtgacagaaaacacactgcagggtttgatgcaa
ctggggagcctgtttgatttttccttcaaaaaactgaggtttcctttgaaatctgaagaa
aatgatgaagaaagcctctgcgctcatgttaggccgaggaatttcaacatttcaaagcaa
attgtgcaaaaatgcttcttcagagttcatccatctgtatcacaggcgttggcagaaaac
agaccagtggttgcgctcgagagcactattatcactcatggcatgccctatcctcacaac
ctgagcacagcaaaggaggtggaggccattgtgcgagctgaagaagccattcctgccacg
gttggagtgattgacggcaaagtccacgttggtctgtcgtcagaggagcttgactacctc
gcccgctacaagagctccatgaaggtgtcccgtcgtgatctgccctacgtcattagcaaa
gggttgtctggaggaacgactgtgtcagccactatgatagcagcacacagagctggcatc
cctgtgtttgtcacaggtggcattggaggagttcacagagatggagagaacagtctagat
atcagtgcagatctaacagagctgggcaggactcccatcactgtggtctctgctggggtt
aagtctattctcgacatcggtcgcaccctggagttccttgagacgcagggtgtctgtgtc
gccacttatggaacatcaaagagtttcccagccttcttctctcctcaaagtggattcact
tccccgtatcaagtgtgcaaccccgaagaggctgcaaaactcatctccagcactctatca
ctgggcctccaaagcggtatcctgttagctgtacccataccagaggagcatgcagcagca
ggccagcagatcgaagaagcgatacagactgcagtgacagaggcaagtgctaaaggcatc
acgggaagagatgtgacgccgtttattcttcaaaaggtcaatgagctgacagatggaaag
tcccttcaggccaacattgctctcattcgtaacaatactaaagttggcagtcagatagcc
tgcgcactgtcaaagcagacaaataagagaaaattaagaagcacacttgatcatggaaaa
aaatctgaatcagatattgttgtcgtagggggaataaatgtggattttattgccaaagga
aaaacaaaaacacttctttttggacagacaaacgcaggaagtgtctgtcagtcatttggc
ggtgtagggcggaacattgctgactctctgagtcgtctaggccataaacccctgttcatc
tctgccactggagctgattcacacagtgatgctgtgttaaactactgtaaacatatgaac
acaagtggcgtggcaaggctacaagatcaacatacagctacttactgtgctgtcatcact
gaaagtggagaactgagtcttggactgggtgacatggatgttcatcagcaaatcacagag
cactatgtgtcacagtttgagaagcagctgtcatcagccactcttgtgtgtctcgatgga
aacatccccacctccactatagactatgtttgttctgttgccaaaaagtacaacattaac
gtttggtatgagccaacagattcagaaaaggcctgtaagcctttcctgtcagacgcctgg
aagtcgctgtcctactcatccccaaacttggcagagctgtgcaccatgaaccaaacattg
ggcatccaaacacctgaagtgcttccgagttccctcgaggaggtgctgagtgttgctgtg
gctctctcacgcccccttctggagcatctccattgtctggtggtcactctgggagctcat
ggagtcctgctgtgtggagagcatgattcaggctcagtcaacctgcagccaagaaaagag
aagaagatgaggaagctttgtgcgaaccactacccagcgctgactgtaactgcagaagag
acaatgaatgtctcaggagcaggagacagtcttgcaggtgccttgatagcagggattctc
cagggccaaaagactgacagctgtgtcaggatggggctcctggctgcacggttgtccctg
gcatctccacaccccatcaaccccatgcttaccttagcctctgtggatcccagtgatatc
cagactcagaactggcccaaaccgagcttcatgtggattgattaa
DBGET
integrated database retrieval system
