Scomber japonicus (chub mackerel): 128359989
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Entry
128359989 CDS
T09718
Name
(RefSeq) latent-transforming growth factor beta-binding protein 4
KO
K08023
latent transforming growth factor beta binding protein 2/3/4
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sjo04990
]
128359989
Domain-containing proteins not elsewhere classified [BR:
sjo04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
128359989
BRITE hierarchy
Motif
Pfam:
EGF_CA
cEGF
TB
EGF
hEGF
EGF_3
FXa_inhibition
Plasmod_Pvs28
EGF_2
EGF_MSP1_1
Motif
Other DBs
NCBI-GeneID:
128359989
NCBI-ProteinID:
XP_053176279
LinkDB
All DBs
Position
6:35940615..36009998
Genome browser
AA seq
1756 aa
AA seq
DB search
MFTPTICKVRCSLDRCVNYCERGNVTTLYSSSEAALAAATALAGGRRDGSHGPGFRVFLC
PLLCKNGGICLQKDRCICPPNFTGKFCQIPVSPTAVAAATAAATAAAAASPSSTNEIVKP
AMLSARQELTQSEFLLPLGGQSQQVGRPGAPGPSMVKVMVQHPPEASVKIHQVRKVSGFS
PTLRTLSSSSHSGSAGAPAPAALAAPAAPAPAAPAAVVAGIQAQTVTGDGTYTQYSGFKY
CFREVKDGQCSSPLPGLRSRDTCCRGIGKAWGTTDCVLCPPNTGQINSSCPVGFERGNGT
QCVDVNECLQPGLCENGICVNTGGSYSCVCRAGFILDASHGICISQSVISDEKGQCFRVL
GAGQGPSSCSLPILRNITKQICCCSRVGKAWGPNCQRCPYFGSVAFKEICPAGPGYHYSA
SALQFNQRATEQLGGRGAQLVTHGNQDTQGAGSGFNSSAGASRSQQTPTSSGATAGEPPP
QLPRPQQPRPQPPPQQPRPQPPPQQPRPQQPRPQQPQLRPQQPPPQTQQPRPQPPPQQPQ
PRPQPQQPHYQPTPQQPRPQQPQPRPQPPPQQPQPRPQQPHHQPTPQQPRPQQPQPRPHQ
PTPQQPRPQQPQPRPHQPTPQQPRPQQPQPRPQPPPQQPQPRPAGSPSSYRPVEPGRPHL
PVEPDESPARGDSLPAPLQPQSPERGSRPSGETVSVTSRPTRVQPVRGVCESRPGVCGRG
RCVDQPGGKYTCVCDQGYQPNAQRTYCQDVNECVQSPGVCAVGECVNNVGSYRCVCPAGY
RSSSSQQTSCHDIDECQQNPCSNGRCDNTPGSYRCVCRLGYRLSGNTCTDIDECEDPLQC
PGQQCRNTPGSYLCVSCQPGYRLVNSICTDIDECRQTSCLNGRCENTPGSYRCTCHYGYK
LQNNTCADVDECAEPSQCPGQMCVNTDGSYRCVSCQPGYTLTNRQCTDIDECTNDVCDAE
QVCVNTFGSYRCECLPGYRTSGLGRQCRDINECLEGDFCFPRGECMNTAGSYTCVCSQGF
KLSDNKTACLDVDECLRSGLCVDGRCVNTEGSFECECQTGFTANPEKTTCLDVDECVSSG
GSVCGSERCENTIGSYQCLTSCEAGYQVSSSGRCADVNECVNQTVCGAHAVCQNLEGTYL
CVCDRGFTSTADGKACVDEDECVTLPGVCGSARCENVEGSFMCECDRRGDEFDTGTRTCV
NTAPPDSFQAVPDYPPDYRPDYRPVPPPDRPPVHPPPPSSSFPVSVVDLPPLPPPQPGEL
RECYYNLAERGTCSLLATNTSQQECCCTVGEAWGMGCQYHTCPPPQTAEFRSLCPSGKGY
LTTVGGAFSYRDVDECKRFYPEVCKNGVCVNNIPGYSCYCPNGYVYNSTLLECVDHDECE
EESCVGGVCVNTVGSYYCSCPPHLVLDDTQRNCVNSSHLTVDENQSLCWQHVNADLMCQS
PLIGGHVTFTDCCCLYGEGWGLECALCPPPDTEEYANLCSSFPPLYPERFPDAGGPEVRP
GAGRGRGGGGGGGRGGGLQDFSRPDYDDYSPAGGSRSGFRGRTPATFSLPDGSYGRSDYG
TGYYSEGDYSPPDGSPPRTPSFRLPPDPRAETGFGARPPPPSRPDGPPLSLAPLAGDPYE
DEEEDEEEAWRPGPPFPPFTERRGGGGGGEGAPRRVYERRYESYAGLSTAEDCGILHGCE
NGRCIRVAEGYTCDCYQGYELDMTSMTCIDINECEDSASVEFPCVNARCVNTEGSFRCVC
RRGYIMSRRPNHCVAA
NT seq
5271 nt
NT seq
+upstream
nt +downstream
nt
atgtttacgccaaccatatgcaaggtgcgctgcagcctggaccgatgcgtcaactactgc
gagagaggcaacgtgaccacgctgtacagcagcagcgaggcggcgttggcggcggcgacg
gcgttagcaggaggaagacgagacggctcccatggaccgggcttcagagtcttcctctgt
cctctgctctgtaagaacggaggcatctgcctgcagaaagatcgttgcatctgtccgcca
aacttcaccggaaagttctgccagatccccgtcagcccgacagccgtcgccgcggccacc
gctgctgccaccgccgccgccgccgcctcgccgtcctccaccaatgagatcgtcaagcct
gcgatgctctccgcccgtcaggagctgactcagtctgagttcctgctgccgctggggggg
caaagccagcaggttgggaggcctggagctcccggcccctccatggtgaaggtcatggtg
cagcacccccccgaggccagcgtgaagatccaccaggtgcggaaggtgtctggattcagc
cccacgctgcggacgctctcctccagctcacactcggggtcggcaggtgctccggcccca
gcggccctggcagccccagcagccccggccccagcagccccggcggcggtggtggcaggg
atccaggcccagacggtgacgggcgacggcacgtacacccagtactccgggttcaagtac
tgcttcagagaagtcaaagacggacagtgcagctctcctctgcctggactgaggagtaga
gatacctgctgcagaggcatcgggaaagcctgggggaccacggactgtgtcctctgtcct
cctaatacaggtcaaatcaacagcagctgtcctgttgggtttgagagaggaaacgggaca
cagtgtgtggatgtgaatgagtgcctccagccggggctgtgtgagaacgggatctgtgtg
aacaccggggggagctatagctgtgtgtgtagggcggggttcatcctcgacgcctcacat
ggaatctgcatctctcagagcgtgatctcagacgagaagggtcagtgtttccgcgtcctg
ggtgcgggtcagggtccgtcctcctgctccctgcccatcctcaggaacatcaccaagcag
atctgctgctgcagccgagtcggcaaagcctgggggcccaactgccagagatgtccttac
tttggttcagtggcctttaaggagatctgtccagcaggtcccggttaccactactccgct
tcagccctgcagttcaaccagagagccacggagcagctggggggccgaggagctcagctg
gtaacccacggcaaccaggatacccaaggtgccggttctgggttcaatagcagtgctgga
gcctccaggtctcagcagacacccacttcctctggagcaacagcaggtgagcctccgccc
cagctgcctcgtcctcagcagcctcgtcctcagcctccaccccagcagcctcgtcctcag
cctccgcctcagcagcctcgtcctcagcagcctcgtcctcagcagcctcagcttcgtcct
cagcagcctcctcctcagactcagcagcctcgtcctcagcctccacctcagcagcctcag
cctcgtcctcagcctcagcagccacattatcagcctacacctcagcagcctcgtcctcag
cagcctcaacctcgtcctcagcctccacctcagcagccgcagcctcgtcctcagcagccg
catcatcagcctacaccacagcagcctcgtcctcagcagcctcagcctcgtcctcatcag
cctacaccacagcagcctcgtcctcagcagcctcagcctcgtccccatcagcctacacca
cagcagcctcgtcctcagcagcctcaacctcgtccccagcctccacctcagcagcctcag
ccccgtccggccggtagcccttcatcctacaggcctgtggagcctggccggccccacctc
ccggttgagccggatgagtcaccagctcgaggggactctctccccgctccgctccagcca
cagagccctgagcgtgggtcgaggcccagcggagagaccgtcagcgtgacgagccggccg
acccgagtccagccagtgcgaggtgtgtgtgagagcagacccggtgtgtgtggacgcggc
cgctgcgtggatcagcctggtgggaaatacacctgtgtgtgtgatcagggataccagccc
aacgcccagcgcacgtactgccaagatgtgaacgagtgtgtgcagtctccaggtgtgtgt
gcggtgggagagtgtgtgaacaacgtcggcagctacaggtgcgtgtgtcccgccggatac
cggagcagcagcagccagcagaccagttgccacgacatcgacgagtgccagcagaatccc
tgcagcaacggtcgctgtgacaacacgcccggcagctacaggtgtgtctgtcgccttggt
tacaggctcagcggcaacacctgcacagatatagacgagtgtgaggatcctctgcagtgt
ccgggtcagcagtgcagaaacactcccggctcttatctctgcgtctcctgtcagcctgga
tacagactggtcaacagcatctgtacagacatcgacgagtgccgccagacttcctgcctc
aacggccgctgtgaaaacacacctggaagctaccgatgcacctgtcactatggttacaag
ctccagaacaacacctgtgcagatgtggatgagtgtgcagagccgtctcagtgtccgggt
cagatgtgtgtgaacactgatggatcgtaccgctgtgtgtcctgccaaccaggatacaca
ctgaccaacagacagtgtacagatatagacgagtgtacaaatgacgtgtgtgatgcagag
caggtgtgtgtgaacacgttcggctcgtacagatgtgagtgtctgcccgggtatcgaacc
tccggcctggggaggcagtgcagagacattaacgagtgtctggagggtgacttctgtttc
cccagaggagagtgtatgaacacggcgggatcctacacgtgtgtgtgctcacaaggattc
aaactgagcgacaacaagaccgcctgcctcgatgtggatgagtgtctgaggtcaggtctg
tgtgtagatggtcgctgcgtgaacactgaaggctccttcgagtgtgagtgtcaaaccggc
ttcaccgccaaccctgagaagacgacctgcctcgatgtagatgagtgtgtttcatctgga
ggttcagtttgtgggtcagagcgatgtgagaatacgattggttcgtaccaatgcctcact
tcctgtgaggcgggctaccaggtctcttcgtcaggcaggtgtgcagacgttaacgagtgt
gtgaaccagacggtgtgtggagctcacgctgtgtgtcagaacctggagggaacctacctg
tgtgtgtgtgaccgcggcttcacctccaccgccgacgggaaggcctgcgtggatgaggac
gagtgtgtgactctgccaggtgtgtgtggttcggctcgctgtgagaacgtggaaggatcc
ttcatgtgtgagtgtgacagacgaggggacgagttcgacaccggcaccaggacgtgtgtc
aacactgcaccaccagattcatttcaagctgtccccgactacccccccgactaccgcccc
gactaccgccccgtcccgccccccgaccgcccccccgtccacccgccgcccccctcctcc
tccttcccggtcagcgtggtggacctgccccccctcccccccccgcagcccggagagctg
agggagtgctactacaacctggcggagagaggaacctgcagcctgctggccaccaacacc
agccagcaggagtgctgctgcacggtgggagaggcctgggggatgggctgccagtaccac
acctgcccccccccacaaacagccgagtttcggtctctgtgtcccagtgggaaaggatat
ctgaccacagtgggaggtgccttcagctaccgagatgtggacgagtgtaagcgtttctat
ccagaggtttgtaagaacggcgtgtgtgttaataacatccccggatacagctgctactgc
cccaatggatacgtctataacagcacactgctggagtgtgtggatcatgatgagtgtgag
gaggagagttgtgtaggaggagtgtgtgtgaacacagttggttcgtattactgcagctgt
cctcctcatctggttctcgacgacacacaacgaaactgtgtcaactcctcccacctcact
gtggatgagaaccagtcactctgctggcagcacgtcaacgcagacctcatgtgtcagagt
ccgctgatcggaggtcatgtcaccttcacggactgctgctgtctgtatggggagggctgg
gggttggagtgtgctctgtgcccaccccccgacaccgaggaatacgccaacctgtgcagt
tcgttccctcctttgtatccggagaggtttccagacgcaggaggaccagaagtgagacca
ggagctggacgaggacgaggaggaggaggaggaggaggaagaggaggaggacttcaagac
ttcagccgcccggactatgacgattactctccagcagggggcagcaggtctggcttcaga
gggaggacgcctgccaccttcagcctgcctgacgggtcctacggcaggtcggactacggt
actggttactactctgaaggagactacagcccccccgacggctccccacccagaaccccc
tccttccgcctgcccccggacccccgagcagagacaggcttcggtgctcggccccctcct
ccgtccaggcccgacggtcctcctctgagcctggccccgctggctggagacccctacgag
gacgaggaggaggacgaggaggaggcgtggaggcccggtccgcctttccctcccttcact
gagaggagaggaggaggaggaggaggagagggagcgccgaggagagtctatgagaggcgt
tacgagtcctacgccggcctgagcaccgcagaggattgtgggatactgcacggctgcgag
aacggcaggtgcatccgcgtcgccgagggttacacctgtgactgttaccaaggttacgag
ctggacatgacctccatgacatgtatagatataaacgagtgtgaggacagcgccagcgtg
gagttcccgtgtgtgaacgctcgctgtgtgaacactgaaggatctttccgctgcgtctgc
aggagaggatacatcatgtcccgcagacccaaccactgtgtggcagcgtag
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