Scomber japonicus (chub mackerel): 128359991
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Entry
128359991 CDS
T09718
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like
KO
K12006
tripartite motif-containing protein 16
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sjo04121
]
128359991
Ubiquitin system [BR:
sjo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
128359991
BRITE hierarchy
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
SPRY
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
zf-RING_10
Prok-RING_4
TRAF3_RING
U-box
Bestrophin
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
128359991
NCBI-ProteinID:
XP_053176280
LinkDB
All DBs
Position
6:complement(36083169..36084818)
Genome browser
AA seq
549 aa
AA seq
DB search
MAQRDQLDRESFSCVICLDLLKDPVTTSCGHSYCMSCIKGFWDGEDQRKIYSCPQCREAF
TPRPVLKKNTMLAALVEQLKKTGLQAAPADHCYAGPEDVACDVCTGRKLKAFKSCLVCLA
SYCENHLQSHYESPTFKKHKLVEPSKKLQENICSLHGRMTEIFCRTDKKSICYLCTMDEH
KGHDTVPAAAERTERQRELEVSRLNIQQRIQDREKDVKLLQQEVEAVSLSADKAVEDSEK
IFTQLIRLLQKRSSDVKQQIRSQQETEVSGVKELQKKLQQEITELKRKDAELKQLSHTED
HNQFLHNYPSVSQLSEPTDSSSINIRPLRNFEDVTAAVSELRDKLQDILRYAWTNISLAV
TEVDVLLSQPEPKTRAEFLKYSREITLDPNTVHKELLLSEGNRKVKYMKQQQSYSSHTDR
FTDHYQVLSRESLTGRCYWEVEWRGRLGVNVAVAYKNISRAGRESVFGRNDKSWCLYCDT
NSYRFYFNNISTRVSGPGSSRVGVYLDHRAGILSFYSVSKTMTLLHRVQTTFTQPLYAGL
WVDSTAELC
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagagagatcagctggaccgagaatccttctcctgtgtgatctgtctggatcta
ctgaaggatccggtgactacttcctgtggacacagctactgtatgagctgtattaaagga
ttctgggatggagaggatcagaggaagatctacagctgccctcagtgcagagaggccttc
acaccgaggcctgtcctgaagaaaaacaccatgttagcagctttagtggagcagctgaag
aagactggactccaagctgctcctgctgatcactgctatgctggacctgaagatgtggcc
tgtgatgtctgcactgggaggaagctgaaagccttcaagtcctgtctggtgtgtctggcc
tcttactgtgagaatcacctccagtctcactatgaatcacctacatttaaaaaacacaag
ctggtggagccctccaagaagctccaggagaacatctgctctcttcatggtaggatgacg
gagattttctgtcgtacagataagaagagtatctgttatctgtgcactatggatgaacat
aaaggccacgacacagtcccagctgcagcagaaaggactgagaggcagagagagctcgag
gtgagtcgactaaacatccagcagagaatccaggacagagagaaagatgtgaagctgctt
caacaggaggtggaggccgtcagtctctctgctgataaagccgtggaggacagtgagaag
atcttcactcagctgatccgtctcctccagaaaagaagctctgatgtgaagcagcagatc
agatcccagcaggaaactgaagtgagtggagtcaaagagcttcagaagaagctgcagcag
gagatcactgagctgaagaggaaagacgctgaactgaagcagctctcacacacagaggat
cacaaccagtttctacacaactacccctcagtgtcacaactcagtgaacctacagactca
tccagcatcaatatccgtcctctgagaaactttgaggatgtgacagcagctgtgtcagag
ctcagagataaactacaggacatcctgaggtacgcatggacaaacatctcactggcagtg
actgaagtggacgttttactgtcacaaccagaacccaagaccagggctgagttcttaaaa
tattcacgtgaaatcactctggatccaaacacagtacacaaagagctgttattatctgag
ggtaacagaaaagtaaaatatatgaaacaacaacagtcttattctagtcacacagacaga
ttcactgatcattatcaggtcctgagtagagagagtctgactggacgttgttactgggag
gtggagtggagaggaagattgggagttaatgtagcggtcgcatacaagaatatcagcaga
gcaggacgtgaatctgtatttggacgtaatgacaaatcttggtgtttatattgtgacact
aacagttatagattttacttcaacaacatctcaactcgcgtctcaggtcctggttcctcc
agagtcggagtgtacctggatcacagagcaggtattctgtccttctacagcgtctctaaa
accatgactctcctccacagagtccagaccacgttcactcagcctctctatgctggactt
tgggttgattccacagcagagttgtgttaa
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