Scomber japonicus (chub mackerel): 128360158
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Entry
128360158 CDS
T09718
Symbol
tyw1
Name
(RefSeq) S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase TYW1
KO
K15449
tRNA wybutosine-synthesizing protein 1 [EC:
4.1.3.44
]
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sjo03016
]
128360158 (tyw1)
Enzymes [BR:
sjo01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.44 tRNA 4-demethylwyosine synthase (AdoMet-dependent)
128360158 (tyw1)
Transfer RNA biogenesis [BR:
sjo03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
128360158 (tyw1)
BRITE hierarchy
Motif
Pfam:
Flavodoxin_1
Wyosine_form
Radical_SAM
Motif
Other DBs
NCBI-GeneID:
128360158
NCBI-ProteinID:
XP_053176499
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All DBs
Position
6:complement(18241548..18310285)
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AA seq
760 aa
AA seq
DB search
MISKTYFAMMHRFVVIIFVFVNCVCTLDTKVSQASHSDSQSYFMAIWHNRLYLYSAAALV
FGVWFSLKMALKRRSLSNEVGSWVYKAVKNNDSSGRDAVVHVSRVNIFYGSQTGTAKGFA
KELSEEVKTLGIPTEVIDMKDYDPDDQLADECTNKSVCVFLVATYTDGQPTENAEWFCKW
LEEASTDFRYGKTYLKGLRYAVFGLGNSVYVGHYNTVGKNVDKWLWMLSGMRIMTRGEGD
CNVVKSRNGSVQADFLAWKGKFLNRLQALSKGEKKKCSGNCKNGGTCNNKNKKKDRQEEE
AAALQNNSSEEDLLESSSDEEDSAMQDEKTPGSVVDMEDLGNIMNSVKKAKSKEEGKGDI
QMVKLSKLNGVKKTEDEGERREMITPTLREALTKQGYKLIGSHSGVKLCRWTKSMLRGRG
GCYKHTFYGIESHRCMETTPSLACANKCVFCWRHHTNPVGTEWRWKMDPAEKILEDALEK
HQNMIRQFRGVPGVKPERYEEGLAVKHCALSLVGEPIMYPEINAFVRLLHSHHISSFLVT
NAQFPKEIRSLVPVTQLYVSVDASTKDSLKKIDRPLFKDFWPRFIDSLKALGEKRQRTVY
RLTLVKSWNVEEMQAYSELIAMGQPDFIEVKGVTYCGESSASSLTMANVPWHQEVVTFVQ
QLADMLPQYEIACEHEHSNCLLIAHTKFKVDGEWWTWIDYDRFQELVQAYEESGGEQSFS
ALDYIAKTPSWALFGAHEQGFDPVDTRYQRRNKTKDISGC
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgatttccaagacatattttgcaatgatgcaccgtttcgtcgtaataatctttgtcttc
gtgaattgtgtttgcactttggatactaaagtgtcacaagcttcccacagtgacagtcag
agttatttcatggcaatatggcacaacagactgtacttatactcagctgctgcacttgtg
tttggggtctggttctcactgaagatggcactaaagaggcgaagcctctccaatgaagtc
ggctcgtgggtctacaaagcagtgaagaacaacgattcctctggcagagatgctgtggtt
catgtgtcacgggttaacatcttctacggttcacagacaggaacggcaaaaggatttgca
aaagagctgtcagaggaggtgaagacacttggcataccaaccgaggtgattgacatgaaa
gactacgatccagatgatcaacttgctgatgagtgcaccaacaagtcagtctgtgtattt
cttgtggccacctacactgacggacagcctacggagaacgctgagtggttctgtaagtgg
ctggaggaggcgtccactgacttcagatatggcaagacctacctcaaaggcctcagatat
gcagtgttcggtcttggcaactctgtctatgttggccactacaacacggtaggtaaaaac
gtggacaagtggctgtggatgctgagtggcatgcgaatcatgaccaggggagagggcgac
tgcaacgtggtgaagagccgtaatggcagcgtccaggcagacttcctggcctggaagggc
aagttccttaaccgtctacaggccctgtccaagggcgagaagaagaaatgcagtgggaac
tgtaagaatggaggaacctgcaataacaagaacaagaagaaagacagacaagaggaggag
gcggcagctctgcagaataacagctcagaggaggatctgttggagtccagcagtgatgag
gaggactctgccatgcaagatgaaaagacacctggttcagtggttgacatggaggatctg
ggcaacatcatgaacagcgtcaaaaaagccaagagcaaagaggagggcaaaggagacatc
cagatggtgaagctatccaagctgaacggagtgaagaagactgaagatgaaggggaaaga
agagagatgatcactcctacccttagagaagcactgactaagcaagggtacaaactaatt
ggaagccactcaggcgtaaagctttgtcgatggaccaagtccatgttacgagggagagga
ggctgttacaagcacaccttctatggtattgagtcccaccggtgcatggagaccaccccg
agtctcgcctgtgctaacaagtgtgtcttctgctggagacatcacaccaaccctgtgggc
acagagtggcgttggaagatggatcctgctgagaaaatcctggaggacgctctggagaag
catcaaaacatgattcgacagtttagaggtgttcctggagtgaagccggagcgatacgag
gagggcttggcagtcaagcactgtgccctctctctggtgggtgagccaatcatgtaccct
gagatcaatgccttcgtccgcctcctccactcccaccacatctccagtttcctggtgacc
aatgcacagttccccaaggaaatcaggagtctggtgccagttacccagctgtatgtgagt
gtggatgcgagcaccaaagatagcctaaagaagattgaccgaccactttttaaggacttc
tggccacgtttcatagacagcctcaaagccctgggagagaagagacagaggacggtgtac
agactgacgctggtgaagtcctggaatgtggaggagatgcaggcctactcggagctcata
gctatgggccagccggacttcattgaggtcaagggagtgacgtactgtggggagagttct
gccagcagcctgaccatggctaatgtcccgtggcaccaggaagtggtcacctttgtccaa
cagctggctgacatgctgcctcagtatgagatcgcctgcgagcatgagcactctaactgt
ctgctcatcgcacacaccaagttcaaggtggacggcgagtggtggacgtggatcgactac
gaccgtttccaggaactggtccaggcttatgaggaaagtgggggagagcagagcttctca
gccctggactacatagccaagacacccagctgggctcttttcggggcccacgagcaaggt
ttcgaccctgtcgacacacgttaccaacgacgcaacaaaaccaaagacatctcaggatgc
tga
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