Scomber japonicus (chub mackerel): 128360934
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Entry
128360934 CDS
T09718
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sjo04121
]
128360934
Ubiquitin system [BR:
sjo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
128360934
BRITE hierarchy
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
SPRY
zf-B_box
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
zf-RING_5
zf-RING_10
zf-RING_6
Prok-RING_4
U-box
UvrD-helicase
MRP-S31
Motif
Other DBs
NCBI-GeneID:
128360934
NCBI-ProteinID:
XP_053177472
LinkDB
All DBs
Position
6:35035967..35037625
Genome browser
AA seq
552 aa
AA seq
DB search
MAQRDQLDRETFSCVICLDLLKDPVGLPCGHSYCMNCIKGFWDGEDQRRMYSCPQCREAF
TPRPVLKKNTMLAALVEQLKTTGLQAAPADHCYAGPEDLACDVCTGRKLKAFKSCLVCLA
SYCEKHLQSHYESPTFKKHKLVEPSKKLQENICSRHGRVTEIFCRTDKKCICYLCTMDDH
KGHDTVSAAAERTERQRELEVSRLNIQQRIQDREKDVKLLQQEVEAVSRSADKAVEDSEK
IFTQLIRLLQKRSSDVKQQIRSQQETEVSGVKELQEKLQQEITELKRKDAELKQLSHTED
HNQFLHNYPSLSQLSEPTDSSSINIRPLRYFEDMTAAVSELRDLLQDILRDKWTNTSLAV
TEVDVLLSEPEPKTRAEFLKYSREITLDPNAAHTHLLLSDGNRKGKGTGQRQSYSSHTDR
FTKYYQVLSRESLTGRCYWEVEWGGGVDVAVAYKNISRAGDESLFGHNDKSWSLYCGTNR
YVFCFNNIETPVSGPDSSRVGVYLDHRAGILSFYSVSETMTLVHRVQTTFTQPLYAGLRL
YYESTAELCKVK
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagagagatcagctggaccgagaaaccttctcttgtgtgatctgtctggatcta
ctgaaggatccggtgggtcttccctgtggacacagctactgtatgaactgtattaaagga
ttctgggatggagaggatcagaggaggatgtacagctgccctcagtgcagagaggccttc
acaccgaggcctgtcctgaagaaaaacaccatgttagcagctttagtggagcagctgaag
acgactggactccaagctgctcctgctgatcactgctatgctggacctgaagatttggcc
tgtgatgtctgcactgggaggaagctgaaagccttcaagtcctgtctggtgtgtctggcc
tcttactgtgagaaacacctccagtctcactatgaatcacctacatttaaaaaacacaag
ctggtggagccctccaagaagctccaggagaacatctgctctcgtcatggtagggtgacg
gagattttctgccgtacagataagaagtgtatctgttatctgtgcactatggatgatcat
aaaggccacgacacagtctcagctgcagcagaaaggactgagaggcagagagagctcgag
gtgagtcgactaaacatccagcagagaatccaggacagagagaaagatgtgaagctgctt
caacaggaggtggaggccgttagtcgctctgctgataaagcagtggaggacagtgagaag
atcttcactcagctgatccgtctcctccagaaaagaagctctgatgtgaagcagcagatc
agatcccagcaggaaactgaagtgagtggagtcaaagagcttcaggagaagctgcagcag
gagatcactgagctgaagaggaaagacgctgaactgaagcagctctcacacacagaggat
cacaaccagtttctacacaactacccctcactgtcacaactcagtgaacctacagactca
tccagcatcaatatccgtcctctcagatactttgaggacatgacagcagctgtgtcagag
ctcagagacctactacaggacatcctgagggacaaatggacaaacacctcactggcagtg
actgaagtggacgttttactgtcagaaccagaacccaagaccagagctgagttcttaaaa
tattcacgtgaaatcactctggatccaaacgcagcacatacacatctgttattatctgat
gggaacagaaaaggaaaagggacgggacaacgtcagtcttattctagtcacacagacaga
ttcactaaatattatcaggtcctgagtagagagagtctgactggacgttgctactgggag
gtggagtggggaggaggagttgatgtagcagtcgcatacaagaatatcagcagagcagga
gatgaatctctatttggacataatgacaaatcttggtctttatattgtggcactaacagg
tatgtattttgcttcaacaacattgaaactcctgtctcaggtcctgattcctccagagtc
ggagtgtacctggatcacagagcaggtattctgtccttctacagcgtctctgaaaccatg
actctcgtccacagagtccagaccacattcactcagcctctctatgctggacttaggctt
tattatgaatccacagctgagttgtgtaaagtgaaatag
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