Scomber japonicus (chub mackerel): 128360938
Help
Entry
128360938 CDS
T09718
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like
KO
K12006
tripartite motif-containing protein 16
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sjo04121
]
128360938
Ubiquitin system [BR:
sjo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
128360938
BRITE hierarchy
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
SPRY
zf-C3HC4_2
zf-C3HC4_3
zf-RING_5
zf-RING_2
zf-RING_10
UvrD-helicase
TRAF3_RING
U-box
MRP-S31
LMBR1
Motif
Other DBs
NCBI-GeneID:
128360938
NCBI-ProteinID:
XP_053177475
LinkDB
All DBs
Position
6:37772555..37774210
Genome browser
AA seq
551 aa
AA seq
DB search
MAQRDQLDRESFSCSICLDLLKDPVTTSCGHSYCMSCIKGFWDGEDQMKIYSCPQCREAF
KPRPVLKKNTMLAALVEQLKKTGLQAAPADHCYAGPEDVACDVCSGRKLKAFKSCLVCLA
SYCENHLQSHYESPTFKKHKLVEPSKKLQENICSRHDEVMKIFCRTDKKCICYLCTMEDH
KGHDTVPAAAERTERQRELEVSRLNIQQRIQDREKDVKLLQQEVEAVSRSADKAVEDSEK
IFTQLIRLLQKRSSDVKQQIRSQQETEVSGVKELQEKLQQEITELKRKDAELKQLSHTED
HNQFLHNYPSVSQLSEPTDSSSINIRPLRYFEDVTAAVSELRDKLQDLLRDEWTNILAAV
TEVDVLLPQPPKTRAEFLRYSREITLDPNTVNTELLLSDENRKVEWKAPQQSYSSHTDRF
TYHLQVLSRESLTGRCYWEVERRGVVRVAVAYKNTSRAGDESLFGRNDKSWSLYCSTNSY
GFSFNNIITRVSGPVSSRVGVYLDHRAGILSFYSVSETMTLLHRVQTTFTQPLYAGLYVG
LTSTVELCKVK
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagagagatcagctggaccgagaatccttctcctgttcgatctgtctggatcta
ctgaaggatccggtgactacttcctgtggacacagctactgtatgagctgtattaaagga
ttctgggatggagaggatcagatgaagatctacagctgccctcagtgcagagaggccttc
aaaccgaggcctgtcctgaagaaaaacaccatgttagcagctttagtggagcagctgaag
aagactggactccaagctgctcctgctgatcactgctatgctggacctgaagatgtggcc
tgtgatgtctgcagtgggaggaagctgaaagccttcaagtcctgtctggtgtgtctggcc
tcttactgtgagaatcacctccagtctcactatgaatcacctacatttaaaaaacacaag
ctggtggagccctccaagaagctccaggagaacatctgctctcgtcatgatgaggtgatg
aagatattctgccgcacagataagaagtgtatctgttatctgtgcactatggaggatcat
aaaggccacgacacagtcccagctgcagcagaaaggactgagaggcagagagagctcgag
gtgagtcgactaaacatccagcagagaatccaggacagagagaaagatgtgaagctgctt
caacaggaggtggaggccgtcagtcgctctgctgataaagcagtggaggacagtgagaag
atcttcactcagctgatccgtctcctccagaaaagaagctctgatgtgaagcagcagatc
agatcccagcaggaaactgaagtgagtggagtcaaagagcttcaggagaagctgcagcag
gagatcactgagctgaagaggaaagacgctgaactgaagcagctctcacacacagaggat
cacaaccagtttctacacaactacccctcagtgtcacaactcagtgaacctacagactca
tccagcatcaatatccgtcctctcagatactttgaggatgtgacagcagctgtgtcagag
ctcagagataaactacaggacctcctgagggacgaatggacaaatatcttagcggcagtg
actgaagtggacgttttactgccacaaccacccaagaccagagctgagttcttaagatat
tcacgtgaaatcactctggatccaaacacagtaaacacagagctgttattatctgatgag
aacagaaaagtagaatggaaggctccacaacagtcttattctagtcacacagacagattc
acttatcatcttcaggtcctgagtagagagagtctgactggacgttgttactgggaggtg
gagaggagaggagtagttcgtgtagcagtcgcatacaagaataccagtagagcaggggat
gaatctctatttggacgtaatgacaaatcttggtctttatattgttccactaacagttat
ggattttccttcaacaacattataactcgcgtctcaggtcctgtttcctccagagtcgga
gtgtacctggatcacagagcaggtattctgtccttctacagcgtctctgaaaccatgact
ctcctccacagagtccagaccacattcactcagcctctctatgctggactttatgttggt
cttacatccacagttgagttgtgtaaagtgaaatag
DBGET
integrated database retrieval system
