Scomber japonicus (chub mackerel): 128360940
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Entry
128360940 CDS
T09718
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sjo04121
]
128360940
Ubiquitin system [BR:
sjo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
128360940
BRITE hierarchy
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
SPRY
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
zf-RING_5
U-box
zf-RING_10
zf-RING_6
UvrD-helicase
zf-RING_11
WDCP
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
128360940
NCBI-ProteinID:
XP_053177477
LinkDB
All DBs
Position
6:36784866..36786518
Genome browser
AA seq
550 aa
AA seq
DB search
MAQRDQLDRESFSCSICLDLLKDPVGLPCGHSYCMSCIKGFWDGEDQRKIYSCPQCREAF
TPRPVLKKNTMLAALVEQLKKTGLQAAPADHCYAGPEDVACDVCTGRKLKAFKSCLQCLA
SYCENHLQSHYESPTFKKHKLVEPSKKLQENICSRHDEVMKMFCRTDKKCICYLCTMDEH
KGHDTVPAAAERTERQRELEVSRLNIQQRIQHREKDVKLLQQEVEAVSRSADKAVEDSEK
IFTQLIRLLQKRSSDVKQQIRSQQETEVSGVKELQEKLQQEITELKRKDAELKQLSHTED
HNQFLHNYPSVSQLSEPTDSSSINIRPLRYFEDVTAAVSELRDKLQDILRDKWTNILAAV
TEVDVLLPQPEPKTRAEFLKYSREITLDPNTAHTHLLLSEGNRKVEWTGQQQSYSSHTDR
FTNCLQVLSRESLTGRCYWEVERRGRVFVAVAYKNISRAGNESVFGHNDKSWALWCDTDN
YEFCFNNISTPVSGPDSSRVGVYLDHRAGILSFYSVSETMTLLHRVQTTFTQPLYAGLSV
LGTAELYKVK
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagagagatcagctggaccgagaatccttctcctgttcaatctgtctggatcta
ctgaaggatccggtgggtcttccctgtggacacagctactgtatgagctgtattaaagga
ttctgggatggagaggatcagaggaagatctacagctgccctcagtgcagagaggccttc
acaccgaggcctgtcctgaagaaaaacaccatgttagcagctttagtggagcagctgaag
aagactggactccaagctgctcctgctgatcactgctatgctggacctgaagatgtggcc
tgtgatgtctgcactgggaggaagctgaaagccttcaagtcctgtctgcagtgtctggcc
tcttactgtgagaatcacctccagtctcactatgaatcacctacatttaaaaaacacaag
ttggtggagccctccaagaagctccaggagaacatctgctctcgtcatgatgaggtgatg
aagatgttctgccgtacagataagaagtgtatctgttatctgtgcactatggatgaacat
aaaggccacgacacagtcccagctgcagcagaaaggactgagaggcagagagagctcgag
gtgagtcgactaaacatccagcagagaatccagcacagagagaaagatgtgaagctgctt
caacaggaggtggaggccgtcagtcgctctgctgataaagcagtggaggacagtgagaag
atcttcactcagctgatccgtctcctccagaaaagaagctctgatgtgaagcagcagatc
agatcccagcaggaaactgaagtgagtggagtcaaagagcttcaggagaagctgcagcag
gagatcactgagctgaagaggaaagacgctgaactgaagcagctctcacacacagaggat
cacaaccagtttctacacaactacccctcagtgtcacaactcagtgaacctacagactca
tccagcatcaatatccgtcctctcagatactttgaggatgtgacagcagctgtgtcagag
ctcagagataaactacaggacatcctgagggacaaatggacaaatatcttagcggcagtg
actgaagtggacgttttactgccacaaccagaacccaagaccagagctgagttcttaaaa
tattcacgtgaaatcactctggatccaaacacagcacacacacatctgttattatctgag
gggaacagaaaagtagaatggacgggacaacaacagtcttattctagtcacacagacaga
ttcactaattgtcttcaggtcctgagtagagagagtctgactggacgttgttactgggag
gtggagaggagaggaagagtttttgtagcagtcgcatacaagaatatcagcagagcagga
aatgaatctgtatttggacataatgacaaatcttgggctttatggtgtgacactgacaat
tatgaattttgcttcaacaacatatcaactcccgtctcaggtcctgattcctccagagtc
ggagtgtacctggatcacagagcaggtattctgtccttctacagcgtctctgaaaccatg
actctcctccacagagtccagaccacattcactcagcctctctatgctggacttagtgtt
ttaggcacagctgagttgtataaagtgaaatag
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integrated database retrieval system
