Scomber japonicus (chub mackerel): 128361548
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Entry
128361548 CDS
T09718
Symbol
usp13
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sjo01002
]
128361548 (usp13)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sjo04121
]
128361548 (usp13)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sjo04147
]
128361548 (usp13)
Enzymes [BR:
sjo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
128361548 (usp13)
Peptidases and inhibitors [BR:
sjo01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
128361548 (usp13)
Ubiquitin system [BR:
sjo04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
128361548 (usp13)
Exosome [BR:
sjo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
128361548 (usp13)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP_var
UBA
zf-UBP
UCH_1
UBA_4
Motif
Other DBs
NCBI-GeneID:
128361548
NCBI-ProteinID:
XP_053178022
LinkDB
All DBs
Position
7:complement(18416655..18448723)
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AA seq
859 aa
AA seq
DB search
MATDLGELLVPYMPTIRVPRTGDRVFKSECVFSFDSPESEGGLYVCMNTFLGFGREHVER
HYRKTGQSVYMHLKRHVKEKATGAAGGAIPRRRNGKVFLDLELNRDFNGEDYEYEDEAKL
VIFPDHFEIPLPNIEELPALVTIACDAVLNAPSAYKKQEPESWEEEIQVSRHARSLRQLD
NGVRIPPSGWKCQKCEMRENLWLNLTDGAVLCGKWFFDGSGGNGHALEHYRETNHPLAVK
LDTITPDGADVYSFEEEEAVLDPHIAEHLTHFGIDMLQMQKRTENGHHTDNNARPRVSEW
EVIQESGMKLKAVYGSGYTGVKNLGNSCYLSTIMQVLFSIPDFQRMYVGNLQRIFDYSPL
DPSQDFATQMAKLGHGLLSGQYSKPPMKSELIEQVMKEEYKHQQQGVSPRMFKSLVSRGH
PEFSSNRQQDAHEFFLHVINQVERNSAGSENPSDAFRFLVEERIQCCQTRRVRYTQRVDY
CIQLPAPIEAATNREELLAYEAKWKDAEENMRAPPEPVRARIPFTACLQAFTEPENVPDF
WSSALQAKSAGVKTSRFSSFPEYLVVQIKKFTFGVDWVPKKLDLAIDVPDFLDLSRLRAT
GLQAGEEELPDLMPPIVLPEDTRDNSMSSIDSPEIDETAVMQLAEMGFPVEACRKAVYYT
GNMGPEMAFNWIIAHMEEPDFAEPLTLPSMIDPGPSTSDSPMGATPLGNSPPEESIAILT
AMGFPRNHSIQALKATNNNLERALDWIFTHPEEEETDALSDMADTEPNDNAFSNANSHSD
STLSPDRDMSGPRVKDGPGRYELFAVISHMGASTMSGHYVCHIKKEGRWVIYNDHKVCLS
ERPPKDLGYIYFYHRLSSS
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atggctacagacttaggagagctgttggtcccttacatgcccaccatcagagtccccagg
acgggagacagggttttcaagagcgagtgcgtcttctccttcgactctccggagtctgag
ggaggcctgtatgtgtgtatgaacacattcctgggcttcggacgagaacatgtggagagg
cattatcgcaaaacaggacagagcgtttacatgcacctcaagcgacatgtcaaagaaaaa
gcaacaggagctgcaggaggtgccatccccagacgaagaaacggaaaagtgtttctagat
ttagagctaaaccgcgactttaatggagaggactatgaatatgaggatgaggccaagctc
gtcatttttccagaccacttcgagatccccttaccaaatattgaggagttacccgctctg
gtgaccattgcctgtgatgctgtcctcaatgcaccatcagcttacaagaagcaggagcct
gagtcctgggaagaagagatccaggtgtccagacatgccaggagcctcagacagctggat
aatggggtcaggatcccccccagcggctggaagtgtcagaagtgcgagatgagagaaaat
ctgtggttgaacctgacagacggagccgtgctctgtgggaagtggttctttgatgggagc
ggaggcaacggccatgctctggagcactacagagagaccaaccacccgctggctgtcaaa
ctggacaccatcaccccagatggagcagatgtttattcatttgaggaagaggaagctgtg
ttggacccccacatagcagaacacttgacacactttggaatagacatgctacagatgcag
aaaagaacagagaatggccaccacacagacaataacgcccgaccgcgggtcagtgaatgg
gaggtgatccaggagtcgggcatgaagctgaaggcggtgtacggttctggttacacgggc
gtcaaaaacctgggcaacagctgctacctcagcacaataatgcaggtcctcttcagcatc
ccagacttccagaggatgtatgtgggcaatcttcagaggatatttgactattcacccctt
gacccctcccaagactttgccacacaaatggctaaactgggacacgggctgctatcaggc
cagtactccaaaccacccatgaaatctgagctcattgaacaggtgatgaaagaagaatac
aagcaccagcagcaaggcgtttcccccaggatgtttaagtccctggtcagcagaggacac
ccagagttttcctccaacagacaacaagacgcccacgagttcttcttgcacgtcatcaac
caggtggagaggaacagtgcaggttcagaaaatccaagcgatgccttccgcttcctagtg
gaggaacgaattcagtgctgccagacacgtcgggttcgttacactcagcgggtggactac
tgcatccagttaccagcccccattgaggccgccactaatcgagaggaactgctggcttat
gaggccaaatggaaggatgctgaggagaacatgagagctcctccagaaccggtgagagcg
aggatccccttcaccgcctgtttgcaggccttcacagaaccggagaacgtccctgacttc
tggagctcagcgctgcaggccaagtcagctggagtcaaaacttcccgtttttcttccttc
ccagagtatctggttgttcagatcaagaaattcacatttggggtagactgggtgccgaag
aagctagatttggccatagatgttccagacttcctggatctgagccgacttcgggccaca
ggactgcaggcgggtgaagaggagctgccagacctcatgcctcccatcgtgctacctgaa
gacactagagataactccatgagctccatagactctccggaaatagatgagacggcagta
atgcagctggcagagatgggcttcccagtggaggcctgtaggaaggcggtctactacaca
ggcaacatgggccctgagatggccttcaactggatcatagcccacatggaggagcccgac
tttgcagaacctctcactctgccatccatgatagatcccggtccctccaccagtgacagt
cccatgggtgccaccccgctgggcaactcaccccctgaggagagcattgccatcctcact
gcaatgggcttcccccgcaatcacagtatccaggccctcaaagctacgaacaataacctt
gaacgagcactcgactggatcttcacccacccggaggaggaggagactgacgctctctca
gatatggcggacacagagcccaatgacaacgctttctccaacgccaactcacacagtgac
tccacactgtccccagacagagacatgtcggggccgcgggtcaaagatggaccgggacgt
tatgagctctttgccgttatcagccacatgggagcatccacaatgtctggacattatgtt
tgtcacatcaaaaaggagggcaggtgggttatctacaacgaccacaaagtgtgtttgtca
gaaaggcctccaaaagacttgggctacatctacttttaccatcgactgtcaagcagttaa
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