Scomber japonicus (chub mackerel): 128362991
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Entry
128362991 CDS
T09718
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-7-like
KO
K04809
nicotinic acetylcholine receptor alpha-7
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04020
Calcium signaling pathway
sjo04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
128362991
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
128362991
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sjo04040
]
128362991
Ion channels [BR:
sjo04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
128362991
BRITE hierarchy
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
SUR7
Motif
Other DBs
NCBI-GeneID:
128362991
NCBI-ProteinID:
XP_053179846
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All DBs
Position
8:complement(18621582..18650685)
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AA seq
542 aa
AA seq
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MRCHKFWGPCSFGFYIWTAILIKGSLQGEHQRRLYKELLANYNRLERPVVNDSAAILVEL
GLTLLQIIDVDEKNQVLMTNAWLQLYWTDIYLSWNPEKYPGVQNLRFPSDQIWTPDILLY
NSADERFDATFHTNVLVNASGYCQYIPPGILKSTCYIDVRWFPFDVQKCDLKFGSWTHNG
WLLDLQMLAVDTSTYIPNGEWDLVGVPAKRNELYYECCKEPYPDVTFTVTMRRRTLYYGL
NLLIPCVLISGLALLVFLLPADSGEKISLGITVLLSLTVFMLLVAEIMPATSDSVPLIAQ
YFASTMMIVGMSVVVTVIVLQFHHHDPQGGKMPKWVRVVLLNWCAWFLRMKQPGDERKRS
GYKSRYSSQHHSSTSSIEMGAVPSLTVPLSQTSCPPCPTGTSNGSMSLYFGNYHPIDSPH
CPPSSDSGVALGGRTHGSISDEAGPPGGVGSGVGGLGMGVGAGMGVSIPPPEIQRILEEV
TYIAQRFRDQDEAEAICSEWKFAAAVVDRLCLVAFSLFSIICTFTILMSAPNFIEAVSKD
FT
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgcggtgccataagttttggggaccatgttcgtttggattttatatttggacagcgatc
cttatcaaaggatccctgcagggggaacaccagaggaggctgtacaaggagcttctagct
aattacaatagactggaaagacctgtagtcaatgactcagctgccatcctggtggagctg
ggcctcacactgctgcagatcatagatgtggatgagaagaaccaagtgctcatgaccaac
gcctggctgcagctgtactggacagacatctacttgagctggaatccagaaaaataccct
ggtgtccagaacctccgattcccttcagaccagatctggacacctgacatcctcctttac
aacagtgcggacgaacgcttcgatgccactttccataccaatgtattggtgaatgcatct
ggttactgccagtacatcccccctggcatcttgaagagcacctgttacatcgatgtgcgc
tggttcccttttgacgtgcagaagtgtgacttgaaatttggctcctggacacacaatggc
tggctgttggacctccagatgctggctgtggacacatccacctacataccgaatggcgag
tgggatcttgttggtgtcccggctaagcgtaatgagctgtactacgagtgctgtaaggag
ccctaccctgatgtgacgttcacagtcactatgcgacgcagaaccctgtattacggactc
aacctgctcatcccctgtgttttgatctctggcttggccctgttggtcttcctgctgcct
gctgactctggggaaaagatctctcttggcatcactgtgctgctttcgctgactgtcttc
atgcttctggtagcagaaatcatgccggccacgtctgactctgttcctcttatcgctcag
tacttcgccagcaccatgatgattgtgggaatgtctgtagtcgtgactgttatagtcctg
cagtttcaccatcatgaccctcagggaggcaagatgcccaaatgggtccgagtggttctg
ttgaactggtgtgcctggtttctgcgtatgaaacaacccggcgatgagcgcaagcgttcc
ggttacaagtcccgctattcctcccagcaccactccagcaccagctccattgagatgggc
gctgtcccaagcctcacggtgccgctctcccagacttcttgcccaccttgccccacaggc
acctccaacggttccatgagcctttactttggcaactaccaccctatagatagtccacac
tgcccaccttctagcgactcaggagtagcgcttgggggacggacccatggctccatcagt
gacgaggctggaccacctggaggagttggaagtggtgttggaggcctgggaatgggagtt
ggagctgggatgggagtcagtattcccccaccagagatccaacgcatcttagaggaggtg
acctacatagcccagcggttccgggaccaggacgaggctgaggccatctgcagcgagtgg
aagtttgcagcagcagtggtggaccggctgtgcttggtggccttctctctcttctcaata
atttgcaccttcaccatcctcatgtcagcacccaacttcatagaggctgtttccaaggac
ttcacatag
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