Scomber japonicus (chub mackerel): 128362998
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Entry
128362998 CDS
T09718
Symbol
stx3b
Name
(RefSeq) syntaxin 3b isoform X1
KO
K08486
syntaxin 1B/2/3
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
128362998 (stx3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128362998 (stx3b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sjo04147
]
128362998 (stx3b)
Membrane trafficking [BR:
sjo04131
]
SNARE
Syntaxin (Qa)
Stx-PM
128362998 (stx3b)
Exosome [BR:
sjo04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
128362998 (stx3b)
Exosomal proteins of other body fluids (saliva and urine)
128362998 (stx3b)
BRITE hierarchy
Motif
Pfam:
Syntaxin
SNARE
Syntaxin_2
EzrA
Relaxase_C
AAA_13
DUF5082
FlaC_arch
DUF3040
YtxH
Branch
DUF1687
DUF6664
Med11
DUF6161
DUF6584
Motif
Other DBs
NCBI-GeneID:
128362998
NCBI-ProteinID:
XP_053179853
LinkDB
All DBs
Position
8:complement(18807792..18820081)
Genome browser
AA seq
289 aa
AA seq
DB search
MKDRLEQLKATCDQDDDEVEIAVDNAAFMDEFFCQIEDIRNSIDKIDENVAEVKKLYSLI
LSAPTSDQKTQDDLEATTNDIKKMANNARNKLKTIERNLESEEQERVSADMRIRKSQHAV
LSRKFVEVMTKYNEAQVDFRERSKGRIQRQLEITGKATTDDELEEMLESGNAAVFTAGIV
DSGISKQALSEIEARHKDIVRLESSIKELHDMFVDIAMLVESQGDIVDNIEQNVSKSVDH
IIAAKEQTKKAIRYQTKARKKMVIIVVVVVILLALLALIIGLSVGLKQS
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaccgattggagcaacttaaagcgacgtgtgatcaagatgatgatgaggtggag
atcgctgtggacaacgcagcgttcatggatgagttcttctgtcagattgaggacatcagg
aacagtattgataaaattgatgagaatgtggctgaagtcaaaaagctttactcactcatc
ctgtctgctcccacatcagatcagaaaacacaggatgacttggaggcaaccaccaacgac
ataaaaaagatggccaacaatgcgagaaacaaactcaagactatcgagaggaatctggag
tcagaggagcaggagagagtgtcggccgacatgcggatacgtaaatcacagcatgcagtg
ctgtccaggaagtttgtggaggtaatgacgaagtataatgaagcccaggtagacttcagg
gagaggagtaaaggacgtattcagagacagctagagatcactggaaaagcaacaacagat
gacgaactggaagagatgttggagagcggtaatgctgctgtgttcactgcagggattgtg
gactctgggatttccaaacaagccctcagtgagattgaagccagacacaaagatatcgtt
cgtcttgaaagtagcatcaaggagctgcacgatatgtttgtagacatcgccatgctggtg
gagagccagggtgacatagtagacaacatagagcagaatgtatccaagtcagtggaccat
ataatagcagctaaggaacagaccaaaaaagctataaggtaccagaccaaagcacgcaag
aaaatggtgattatagtggtggttgtggtgatcttgctggcactgctagctctcattatc
gggttgtcagtgggattgaagcaaagctga
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integrated database retrieval system