Scomber japonicus (chub mackerel): 128363361
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Entry
128363361 CDS
T09718
Symbol
rapgef2b
Name
(RefSeq) rap guanine nucleotide exchange factor 2 isoform X1
KO
K08018
Rap guanine nucleotide exchange factor 2
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04010
MAPK signaling pathway
sjo04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
128363361 (rapgef2b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
128363361 (rapgef2b)
BRITE hierarchy
Motif
Pfam:
RasGEF
PDZ
RasGEF_N
RA
PDZ_6
cNMP_binding
PDZ_2
Motif
Other DBs
NCBI-GeneID:
128363361
NCBI-ProteinID:
XP_053180319
LinkDB
All DBs
Position
8:26129201..26238226
Genome browser
AA seq
1635 aa
AA seq
DB search
MASYVDNSFRQAVMMNPADRTQQDLEIVYSYLHGMEALSNLREHQLRIMCETVRYERHEA
NEVLYYPDDIGSCWYILLSGSVFIKESMFLPRSSFGKRSAGSLRRGCECIVLEPSEMIVV
DYMDENEEYFQRQASHRQSRRRFRKINQKGERQTIIDTVDPYPTGKPPIARGYHTLPADF
SRLHLADGLHPQVTHVSSSHSGCSITSDSGSSSLSDIYQATENEQGDMDLSGLPETAVDS
EEDDDEEDIERASDPLMSRDIVRDCLEKDPMDRTDDDIEQLLEFMHQLPAFANMTMSVRR
ELCAVMVFAVVERAGTIVLNDGEELDSWSVILNGSVEVTYPDNRTETLCMGNSFGVSPTM
EKEYMKGVMKTKVDDCQFVCIAQQDYCCILNQVEKNMQKVEEEGEIVMVKEHRELDRTGT
RKGHIVIKGTPERLTMHLVEEHSVVDPTYIEDFLLTYRTFLSSPMVVGKKLLEWFHDSSL
RDKVTRVVLLWVNNHFNDFEGDTAMTRFLEEFENNLEKEKMCGHLRLLNIACAAKAKPRL
VTLTKPSREAPLAFSLLGGQEKGFRIFIDAVEGGSKAAEAGLKRGDQILEVNGQNFENVQ
LNKANEILKNNTHLSITVKTNLLVFKELLTRPEHDHDMDGEEEHDRKNGAPHLPKIGDIK
KASRYSIPDLAVDVEQVMGLEKVSKKAKANTVGGRNKLKKIFDKTLTSILPPKPYNDVCV
GQSQDDSIVGMKQSKQIPPALPVSGNLSSSNPDLLQSHHRILDFSNQPDMSDQVLRVFKA
DQQSRYIMIGKDTTAKEVVAQAIREFALTAAPEAYSLCEVSVTPEGVIKQRRLPDQLSKL
ADRIQLSGRYYLKSNMETETLCSDDDAQDLLREAQISLLQLSTVEVATQLSMRAFELFCA
IEPTEYIDDLFKLRSKTGSASLKRFEEAINHETFWVATEVTREPNQLKRMKTIKHFIKIA
LHCRECKNFNSMFAIISGLNLAPVSRLRGTWEKLPSKYEKLFGDLQDLFDPSRNMAKYRN
VLNNQNLQPPIIPLFPVIKKDLTFLHEGNDSKVDGLVNFEKLRMIAKEIRHVGRMASVNM
DPALMFRTRSLSQGSANAAVLDVTQTGGHKKRVRRSSFLNAKKLYEDAQMARKVKQYLSN
LSLETNEESLQTLSLQCEPSISTLPKNAGGKRPDTSPVVSRAASQQRGQLAKGNQALQVP
AVALYPSRKKVPVKDLPPFGTSSPQSLKKILSLSEEGNERHRRQPEDTVSNASSQLSSPP
TSPQSSPKKGYNRMGDAYSDSGHSEISSRSSLVSNSSFDMAQEERRLRHSGGIGESHLGG
PRLERRATTDPDQYSLGSYSSMQDCRGIYAGCPTVLSSPSSEELTQDQGDRVSLDAADSG
RGSWTSCSSGSHDNIQTMQQGRSWETLAFGGGGGGIGGLPPGGPEALLGGPAALWAAQAR
GSWASASSSSSSAAYWGEDSEGDTGTIKRRGGKDVNADPETSSITSTGSEEAKQLGRPSP
SPITAGGKGLITRKESRYRDPPPTPPGYTALTISDLAEGQHPAPSVPTSTATHSGRRPPD
YTTALQRSRMVTQSPDSHQAHQGAKQRAGGLHRTRSPAEEQEPEEEEEGESLSSKLVALR
KPKPVAQHTPETPRP
NT seq
4908 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcttatgtggataacagctttcggcaggctgtgatgatgaatccggctgatagg
acgcaacaggacctggagatcgtctactcttatctccatggcatggaggccttgtccaac
ctgcgagagcaccagctgaggataatgtgtgagacggtgcgttatgagagacacgaggcc
aatgaagtactatactaccccgacgacattggaagctgctggtacatcctgttatctggc
tccgtcttcatcaaggagtccatgttcctgcccagaagcagttttgggaagcggtcggca
ggcagcctgcgacgtggatgtgagtgcatcgttctggaaccatcagagatgattgtggtg
gactatatggacgaaaatgaggagtacttccagcggcaagcctcacaccgacagtcccgt
cggcgctttcggaagatcaaccagaaaggggagaggcagacaatcatcgacaccgtggat
ccgtatcccaccggaaagccgcccatagcccggggataccacacgctccccgcagacttc
agcagacttcacctggccgacggcttgcacccacaggtgacccacgtctcctccagccac
tcaggatgtagtatcaccagcgactctggaagcagcagcctgtcagacatttaccaggcc
acagagaacgaacaaggtgacatggacctgagtggcctgccagagactgcagtcgactcc
gaggaggacgatgatgaggaagacatcgagagagcttcagatcccctcatgagccgggac
atcgtccgggactgcctggagaaggacccaatggacagaactgacgatgacatagagcaa
ttactggagttcatgcatcaactgccagcatttgccaacatgaccatgtcagtgaggagg
gaactctgcgccgtcatggtttttgctgtagtggaacgcgccggcaccatcgttctcaat
gatggagaggagctggactcatggtctgtgattctgaacggttcggtggaagtgacgtac
cccgacaaccggacagagaccctttgtatggggaacagcttcggggtatcaccaaccatg
gagaaagaatacatgaagggcgtcatgaagaccaaggtggacgactgccagtttgtgtgt
atagcccagcaggactactgctgcatcctcaaccaggtcgagaagaacatgcagaaggtg
gaagaggaaggggagatcgtcatggtgaaggaacaccgcgaactggaccgcactgggacc
aggaaaggacacattgttattaagggcacaccggaacgtctcaccatgcacctagtggag
gaacactcagtggtggaccccacctacattgaggacttcctgttgacctacaggacattc
ctctccagccccatggtcgtgggcaagaagctcctggagtggttccacgactccagtctc
agggacaaggttacacgggtagtcttgctgtgggtaaacaatcacttcaatgactttgag
ggtgacactgccatgacacgctttctggaggagtttgaaaacaatctggagaaagaaaaa
atgtgtgggcacctcagactgttaaacatagcatgtgctgctaaagccaagccacggctg
gtgacactgaccaagccgtccagggaggctccactggccttcagtcttctcggaggtcag
gagaaaggtttccgcatcttcattgatgctgtggagggcgggagcaaggcagcagaagct
ggccttaagcgtggagatcagatcttggaggtcaatgggcagaactttgagaatgtccag
ctcaacaaagccaatgagattctgaagaacaacacccacttgtccataactgtgaaaaca
aatcttttagtgtttaaagagctgctaaccaggccagaacatgaccatgacatggatggt
gaggaggagcacgacagaaagaacggggcaccccaccttccaaagattggggacatcaag
aaggccagccgctactccatccccgacctggcagtggatgtggagcaggtgatgggcttg
gagaaggtcagcaagaaggcaaaggccaacacggtgggaggacgcaacaagctgaagaag
atcttcgacaagacactcaccagcattctgcctcccaaaccatacaatgacgtttgcgtt
ggccaatcgcaggacgacagcattgtggggatgaagcagtccaaacagatcccaccagct
ctgcctgtcagcggcaacctctcgtcgtcaaacccagatcttctgcagtctcaccaccgc
atcctcgacttcagcaaccagcctgatatgtcagaccaggtattacgagtcttcaaggca
gatcagcagtctcggtacatcatgatcgggaaggacaccacggctaaggaggtggtggcc
caggccattagggagtttgccctgaccgcagcaccggaggcttattctctgtgcgaggtc
tccgtcacgccagagggcgtcatcaaacagaggcggttacctgaccaactctctaaacta
gcagacaggattcaactaagtggcagatactacctaaagagcaacatggagacagagacg
ttatgttcggatgatgacgcccaggacctccttcgagaagcccagatctccctgttacag
ctcagtacggtggaggtggccacacagctctccatgcgggcctttgaactgttctgtgcc
atcgagcccacagaatacatcgacgacctgttcaagctgcgctccaagaccggctcggcc
agcctgaagcgctttgaggaggccatcaaccacgagaccttctgggtggccacagaggtg
acgcgggaacctaaccagcttaaacgcatgaagaccatcaagcacttcatcaagatcgcc
ctgcactgccgcgagtgcaagaacttcaactcaatgtttgcaatcatcagcggtctaaac
ctggctccagtctccagactgaggggaacatgggagaaactacctagcaaatatgaaaag
ctgtttggggacctgcaagacctcttcgacccctccagaaacatggccaagtacaggaac
gttctcaacaatcagaacctccagccaccaatcatccccctgttccccgtcatcaagaag
gacctcactttcctacatgaaggcaatgactctaaagtggacggtctggtgaactttgag
aagctgaggatgattgccaaagaaattcgccatgttggtcgcatggcctctgttaacatg
gaccctgccctcatgtttaggaccaggtctctaagccagggtagcgccaatgcggcagtg
ctcgacgtcacccagacaggcgggcacaagaagcgggtgcgacgcagctcattcctgaat
gccaaaaagctttacgaggatgcccagatggccaggaaggtcaaacagtatctgtccaat
ctcagcctggaaactaacgaggagagtctgcagacgctctcgctacagtgtgaaccctcc
ataagtacactgcccaagaatgctggtgggaaacgaccagacacctcaccagtcgtctcc
agagctgccagccaacagaggggccagctggctaaaggaaaccaggccctgcaggtcccc
gctgtggccctgtacccatcccgaaagaaagtgccagtcaaggatctgccacctttcggc
accagttccccccagtctctgaagaagatcctgtctctgtcagaggaggggaacgaaagg
cacagaaggcagccagaggacaccgtgtccaacgcctcctcccagctctcctctcctccc
acctccccccagagctcgcccaagaagggctacaacaggatgggagatgcctactcagac
tccggtcacagtgagatctcctctcgctccagtctcgtcagtaactcctctttcgacatg
gcccaagaagaaagaagactccgtcattccggaggaatcggagaatcccacctcggggga
ccacgactggagcgaagagcaaccaccgatcctgaccagtacagcctggggtcatattca
tcaatgcaagactgtcgaggcatttacgccggctgccctacggtgctctcctcacccagt
tcagaggaactgactcaggatcagggtgatcgtgtttccctcgatgctgcagacagcggc
cgtggctcctggacttcctgctcctctggttcccacgacaacatccagaccatgcagcag
ggacgtagctgggagactctggcctttggcggaggcggaggtggcatcggagggctccct
cctggcggaccggaggccttattaggaggacctgctgcactgtgggcagcccaagccagg
gggagctgggcatctgccagctcctcctcctcctcagccgcgtactggggagaggactct
gagggtgacaccggtaccattaagagaagaggagggaaggatgtcaacgctgacccagaa
acaagtagcatcacatccaccgggtcagaagaggccaagcagctcggtcggccctcccca
tcaccgatcaccgctgggggtaaaggcctcatcacacggaaagagagccgttaccgtgat
cctcccccaacaccacccggctacactgccctgaccatctctgacctcgccgaaggacag
cacccagctccgtctgttccaacgtccacggcgacccactctggccgccggccaccggac
tacaccacagctctgcagcgctcacgcatggtcacccaatcgcctgactcccaccaggcc
caccagggggccaaacagcgggcgggcggcctccaccgcactcgctcaccggctgaggaa
caagagcccgaggaggaagaggagggtgagtccttgtcttccaaactagtcgctctgagg
aagccaaagccagtggcacaacatacacctgagactcccagaccatga
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integrated database retrieval system
