KEGG   Scomber japonicus (chub mackerel): 128364423
Entry
128364423         CDS       T09718                                 
Name
(RefSeq) zinc-binding protein A33-like
  KO
K12012  tripartite motif-containing protein 35
Organism
sjo  Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:sjo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:sjo04121]
    128364423
Ubiquitin system [BR:sjo04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    128364423
Motif
Pfam: PRY SPRY zf-RING_UBOX zf-B_box zf-C3HC4_4 zf-C3HC4 zf-C3HC4_3 zf-C3HC4_2 zf-RING_5 zf-RING_2 DUF4200 zf-RING_6 U-box Prok-RING_4 zf-rbx1 Gp58 GldM_1st Urb2 zf-RING_10 zf-Nse DUF6845 DUF1664 Fib_alpha Syntaxin-6_N CCDC22_CC Med21 TetR_C_37 End3 zf-ANAPC11
Other DBs
NCBI-GeneID: 128364423
NCBI-ProteinID: XP_053180928
LinkDB
Position
9:complement(8794639..8796105)
AA seq 475 aa
MAEKIALVESYLSCHVCSETFRDPVSLSCSHSFCSSCLQKFWEQAKNKNCPICKRKSSKD
RPAVNFSLKELADSFAERLKVGSSETEKGEKKGEVVCSKHQEEPKFFCKDEQRAVCPSCD
FPHQIGHKVVPVEQAVSDLKDQLKSDLKPLQDKRDKYKQVEKTYNEMIQHSKKQLLSTEK
QIRAEFNKLHQFLKEEEESRLAALREEEEQKGKTMSREMKRIQEQISSLSDSISAVEEDL
KKHNVSFLSSYKPTQTRARAQSSLSDPQLVSGALIDEAKHLGNLSFRVWEKMKEKVHFSP
VILDPNTAHPRLYLSDDLTSVRNGDTYQQLPDNPERNTNGPNVLGSEGFSSGKHSWEVEV
GDHPDWTVGLAKESVDRKGKCSATPKNGFWCLLHRSGKYTNGLSKTVTEKKSLQRIRVQL
DYDRGEVSFYDPEDETHIYTHRDTFTERLFPYFSIGPAGDAKTTDIKICQTEISL
NT seq 1428 nt   +upstreamnt  +downstreamnt
atggctgagaaaattgctcttgttgaaagttacttgagttgccatgtgtgttcagagact
ttcagagatcctgtgtctctgagctgcagccacagcttctgttcaagctgtctgcaaaaa
ttctgggaacaagctaaaaacaaaaactgtcccatttgtaaaagaaaatcttcaaaggat
cgtccagcagtgaacttttcactgaaggaactagctgactcatttgctgagagactgaaa
gttggatcatctgaaacagaaaaaggagaaaagaagggggaggtggtgtgtagcaaacat
caagaagagcctaaatttttctgtaaagatgaacagagagctgtgtgtccttcctgtgat
tttcctcaccaaatcggtcacaaggtggttcctgtagaacaagcagtcagtgacctgaag
gaccagctgaaatctgacttaaagcctctacaggacaagagagacaaatacaaacaagtg
gagaaaacatacaatgaaatgattcaacactccaagaagcagctcttgtccaccgagaag
cagatcagagcagagttcaacaagctccaccagttcctgaaagaggaagaggagtccaga
ctggcagctctgagggaggaagaggagcagaaggggaagactatgagcagagagatgaag
aggattcaggagcagatctcctctctgtcagacagtatctctgctgttgaagaagacttg
aagaaacacaacgtgtcattcctcagcagttataaacccactcagaccagagccagagcc
cagagctcactgtcagatccacagctggtctcaggagcgctgatagatgaggccaaacac
ctgggcaacctgtccttcagagtctgggagaagatgaaggagaaggtccacttcagtcct
gtcattctggacccaaacactgcacatccccgtctctatctgtctgatgatctgaccagt
gtgagaaatggagacacatatcagcagctccctgataatccagagagaaacactaatggt
cccaatgttctgggctctgagggcttcagctcagggaaacacagttgggaggtggaggtg
ggagaccatcctgactggactgtgggtttggctaaagagtcagttgacaggaagggaaag
tgttctgctacaccaaaaaatggattctggtgtttactgcatcgcagtggaaaatacact
aatggtcttagtaagactgttacagagaagaaaagtctccagaggatcagagtccagctg
gactatgacaggggggaggtgtccttctacgaccctgaagacgagactcacatctacact
cacagagacactttcactgagagactcttcccttatttcagtattggaccagctggtgat
gctaaaaccactgatatcaaaatctgtcaaactgagatttctctgtga

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