Scomber japonicus (chub mackerel): 128364423
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Entry
128364423 CDS
T09718
Name
(RefSeq) zinc-binding protein A33-like
KO
K12012
tripartite motif-containing protein 35
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sjo04121
]
128364423
Ubiquitin system [BR:
sjo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
128364423
BRITE hierarchy
Motif
Pfam:
PRY
SPRY
zf-RING_UBOX
zf-B_box
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_5
zf-RING_2
DUF4200
zf-RING_6
U-box
Prok-RING_4
zf-rbx1
Gp58
GldM_1st
Urb2
zf-RING_10
zf-Nse
DUF6845
DUF1664
Fib_alpha
Syntaxin-6_N
CCDC22_CC
Med21
TetR_C_37
End3
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
128364423
NCBI-ProteinID:
XP_053180928
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All DBs
Position
9:complement(8794639..8796105)
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AA seq
475 aa
AA seq
DB search
MAEKIALVESYLSCHVCSETFRDPVSLSCSHSFCSSCLQKFWEQAKNKNCPICKRKSSKD
RPAVNFSLKELADSFAERLKVGSSETEKGEKKGEVVCSKHQEEPKFFCKDEQRAVCPSCD
FPHQIGHKVVPVEQAVSDLKDQLKSDLKPLQDKRDKYKQVEKTYNEMIQHSKKQLLSTEK
QIRAEFNKLHQFLKEEEESRLAALREEEEQKGKTMSREMKRIQEQISSLSDSISAVEEDL
KKHNVSFLSSYKPTQTRARAQSSLSDPQLVSGALIDEAKHLGNLSFRVWEKMKEKVHFSP
VILDPNTAHPRLYLSDDLTSVRNGDTYQQLPDNPERNTNGPNVLGSEGFSSGKHSWEVEV
GDHPDWTVGLAKESVDRKGKCSATPKNGFWCLLHRSGKYTNGLSKTVTEKKSLQRIRVQL
DYDRGEVSFYDPEDETHIYTHRDTFTERLFPYFSIGPAGDAKTTDIKICQTEISL
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggctgagaaaattgctcttgttgaaagttacttgagttgccatgtgtgttcagagact
ttcagagatcctgtgtctctgagctgcagccacagcttctgttcaagctgtctgcaaaaa
ttctgggaacaagctaaaaacaaaaactgtcccatttgtaaaagaaaatcttcaaaggat
cgtccagcagtgaacttttcactgaaggaactagctgactcatttgctgagagactgaaa
gttggatcatctgaaacagaaaaaggagaaaagaagggggaggtggtgtgtagcaaacat
caagaagagcctaaatttttctgtaaagatgaacagagagctgtgtgtccttcctgtgat
tttcctcaccaaatcggtcacaaggtggttcctgtagaacaagcagtcagtgacctgaag
gaccagctgaaatctgacttaaagcctctacaggacaagagagacaaatacaaacaagtg
gagaaaacatacaatgaaatgattcaacactccaagaagcagctcttgtccaccgagaag
cagatcagagcagagttcaacaagctccaccagttcctgaaagaggaagaggagtccaga
ctggcagctctgagggaggaagaggagcagaaggggaagactatgagcagagagatgaag
aggattcaggagcagatctcctctctgtcagacagtatctctgctgttgaagaagacttg
aagaaacacaacgtgtcattcctcagcagttataaacccactcagaccagagccagagcc
cagagctcactgtcagatccacagctggtctcaggagcgctgatagatgaggccaaacac
ctgggcaacctgtccttcagagtctgggagaagatgaaggagaaggtccacttcagtcct
gtcattctggacccaaacactgcacatccccgtctctatctgtctgatgatctgaccagt
gtgagaaatggagacacatatcagcagctccctgataatccagagagaaacactaatggt
cccaatgttctgggctctgagggcttcagctcagggaaacacagttgggaggtggaggtg
ggagaccatcctgactggactgtgggtttggctaaagagtcagttgacaggaagggaaag
tgttctgctacaccaaaaaatggattctggtgtttactgcatcgcagtggaaaatacact
aatggtcttagtaagactgttacagagaagaaaagtctccagaggatcagagtccagctg
gactatgacaggggggaggtgtccttctacgaccctgaagacgagactcacatctacact
cacagagacactttcactgagagactcttcccttatttcagtattggaccagctggtgat
gctaaaaccactgatatcaaaatctgtcaaactgagatttctctgtga
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