Scomber japonicus (chub mackerel): 128364430
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Entry
128364430 CDS
T09718
Name
(RefSeq) nuclear factor 7, brain-like
KO
K12012
tripartite motif-containing protein 35
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sjo04121
]
128364430
Ubiquitin system [BR:
sjo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
128364430
BRITE hierarchy
Motif
Pfam:
PRY
SPRY
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
zf-B_box
zf-RING_5
zf-RING_2
Prok-RING_4
zf-RING_6
DUF4200
U-box
Urb2
zf-Nse
zf-RING_10
zf-rbx1
Baculo_IE-1
Sina_RING
GldM_1st
TetR_C_37
zf-RING_4
DUF6845
GLE1
TMPIT
MbeB_N
Motif
Other DBs
NCBI-GeneID:
128364430
NCBI-ProteinID:
XP_053180933
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All DBs
Position
9:complement(8806918..8808404)
Genome browser
AA seq
474 aa
AA seq
DB search
MAEKALLRSYLSCHVCSETFRDPVSLSCGHSFCSSCLQKFWEQAKNKNCPICKRKSSKDN
PLVIFSLKELADSFARIQKAGSSETEKGEKEVEVVCSKHQEEPKLFCKDEQRAVCTVCDF
PHQKDHNVVPVEQAVSELKDQLESDLKPLQDKRDKYKQVEKTYNEMIEHSKKQLLSTEKQ
IRAEFNKLHQFLKEEEESRLAALREEEEQKGETMSRAMKRIQEQIFSLSDSISAVKEDLQ
KHNASFLSSYKATQSRARAQSSLSDPQLVSGALIDEAKHLGNLSFRVWEKMKEKVHFSPV
ILDPNTAHCCLYLSDDLTSVRQGDTKQQLPDNPERHTKYANVLGSEGFSSGKHSWEVEVG
DHPDWSVGLDKESVDRKGERFASPENGIWCLVHCSGKYINGLSKTVTEKKSLQRIRVQLD
YDRGEVSFYDPEDKTLIYTYRDTFTEKLFPYFSIGKSGDAKTTDIKICQTEISL
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggctgagaaagctcttctccgaagttacttgagctgccatgtgtgttcagagactttc
agagatcctgtgtctctgagctgcggccacagcttctgttcaagctgtctgcaaaaattc
tgggaacaagctaaaaacaaaaactgtcccatttgtaaaagaaaatcctccaaagacaat
cctttggtgatcttttcactgaaggaactagctgactcatttgctaggatacagaaagct
ggatcatctgagacagaaaaaggagaaaaggaggtggaggtggtgtgtagcaaacatcaa
gaagagcctaaattgttttgtaaagatgaacagagagctgtgtgtaccgtctgtgatttt
cctcaccaaaaagatcacaatgtggttcctgtagaacaagcagtcagtgaactgaaggac
cagctggaatctgacttgaagcctctacaggacaagagggacaaatacaaacaagtggag
aaaacatacaatgaaatgattgaacactccaagaagcagctgttgtccacagagaagcag
atcagagcagagttcaacaagctccaccagttcctgaaagaggaagaggagtccagactg
gcagctctgagggaggaagaggagcagaagggggagactatgagcagagcgatgaagagg
attcaggagcagatcttctctctgtcagacagtatctctgctgttaaagaagacctgcag
aaacacaacgcgtcattcctcagcagttataaagccactcagagcagagccagagcccag
agctcactgtcagatccacagctggtctcaggagcgctgatagatgaggccaaacacctg
ggcaacctgtccttcagagtctgggagaagatgaaggagaaggtccacttcagtcctgtc
attctggacccaaacactgcacattgctgtctctatctgtctgatgatctgaccagtgtg
agacagggagacacaaagcagcagctccctgataatccagagagacacactaagtatgcc
aatgttctgggctctgagggcttcagctcagggaaacacagctgggaggtggaggtggga
gaccatcctgactggtctgtgggtttggataaagagtcagttgacaggaagggagagcga
tttgcttcaccagaaaatggaatctggtgtttagttcattgcagtggaaaatacattaat
ggtcttagtaagactgtcacagagaagaagagtctccagaggatcagagtccagctggac
tatgacaggggggaggtgtccttctacgaccctgaagacaagacgctcatctacacttac
agagacactttcactgagaaactcttcccttatttcagtattggaaagtctggtgatgct
aaaaccactgacatcaaaatctgtcaaactgagatttctctgtga
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