Scomber japonicus (chub mackerel): 128364894
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Entry
128364894 CDS
T09718
Name
(RefSeq) integrin alpha-2-like
KO
K06481
integrin alpha 2
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03271
Virion - Rotavirus
sjo04145
Phagosome
sjo04510
Focal adhesion
sjo04512
ECM-receptor interaction
sjo04810
Regulation of actin cytoskeleton
sjo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
128364894
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128364894
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
128364894
09144 Cellular community - eukaryotes
04510 Focal adhesion
128364894
09142 Cell motility
04820 Cytoskeleton in muscle cells
128364894
04810 Regulation of actin cytoskeleton
128364894
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sjo04147
]
128364894
04515 Cell adhesion molecules [BR:
sjo04515
]
128364894
04090 CD molecules [BR:
sjo04090
]
128364894
Exosome [BR:
sjo04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
128364894
Exosomal proteins of bladder cancer cells
128364894
Cell adhesion molecules [BR:
sjo04515
]
Integrins
Integrin alpha subunits
128364894
CD molecules [BR:
sjo04090
]
Proteins
128364894
BRITE hierarchy
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_2
Integrin_A_Ig_3
Integrin_A_Ig_1
VWA_2
FG-GAP_3
ITGAX-like_Ig_3
Abhydrolase_8
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
128364894
NCBI-ProteinID:
XP_053181489
LinkDB
All DBs
Position
9:complement(14873035..14890411)
Genome browser
AA seq
1186 aa
AA seq
DB search
MECFWRNTLLFTIIVICDRICYSQSFNVGTAGTKIFSGPAAEEFGYTVQQTTNHEGQWLL
VGAPWSGFSRNRKGDVYKCPVSGSRNSCDKLNLQDSVSIPDVKNILNNMSLGLTLTRGRT
VDDLMMCGPLWGQLCGTQDFYPGICARLNPLFQPQPAFSPALQTCGGPMDIVIVLDGSNS
IYPWDPMNAFLQKLIPTLDIGPKTTQVSVIQYGVDNKLEFKLNQYETKDQVLVAVSRISQ
KYGTSTNTFGAIRYASQLGFDPSNGGRPGAAKVMVVVTDGESHDVSLRDAVLAECERKGI
TRFGIAVLGYYIRTNKDTSNLIEEIKSIASSPIEKYFFNVSEEAALSTIAGTLGSRIFNI
EGTGKGGDNFKMEMSQVGFSAHYSSKQDVIMLGAVGAYGWSGTVVHQTGSKFDIFPSSAF
EGILQDRNHSSLLGYSVSTLSDGSTEYFVAGAPRSNHSGQVIVYTINAQKQASIIDSERG
KQIGSYFGSVLCSLDVDKDRVTDILLVGAPMFMSELKREQGRVYLFSVTKGILNEQGFLN
GPAPTENARFGMSVSAAPDLDLDGYNDVVVGAPLEEKGKGVIYIYNGREKTINKEFSQRI
FGSKLDPQIKYFGRSLDSYKDLNGDTLPDISVGAYGKVVQLWSRGVASVSATASFNPDKI
NIFSKPCNIGGRQLSCFITKLCFDATFKPKNPVGPIDISYTLTLDADLQSSRVTSRGMFT
KNNERLLTENAKISSTPLCQEYQVYVQETPDFVNSLSLKVEIQQQNENANPVLDISSPSA
WQFFNPFTKDCGSDDVCVSDLVLSVKTDTKASSSAPVLVSDSNRELSFQVTVKNKKENAY
NTQVLVTYSNNLYYSSVIPPTDGVKCTSTEAQIVTCQVGYPALKTNEEMKFQINFDYNQE
VLLKQAKVKFEAKSDGKEERPADNTVEISIPVQYDAGISLLRHSNINFYVADSTAPVITT
VKSLDDIGPEFNFTVKVSTGTFPVNLLYMTIALPMKTNGGNQLLYVTKVETQAGGSVSCD
SSSLVDQLKIGVKSHQVSFSEESFRGMEKLDCKNAKCEYIKCIIKDTEAKSDYYVKVKTR
IWSGTFITATYQTTELTCSVDVETSNPDLLIIGHKQLPVVVTVSKPGEKGDVPVGVIVGS
VIAGLVLLALAVGLLWKFGFFKRKYQQLQKEDDDDMQSHPHENEVL
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
atggagtgcttctggaggaataccttgttgttcactattatcgtcatttgtgacagaatc
tgctactctcagtctttcaacgttggaactgcaggaaccaagattttcagcggaccagca
gcagaggagtttggctatacagtccaacaaacaacgaaccatgaaggccaatggctcctg
gttggtgctccatggagtggtttcagtcgaaacaggaagggggatgtttacaagtgtcca
gtctcagggtccagaaacagctgtgacaagctcaacctacaagattctgtcagtattcca
gatgtcaaaaacatacttaacaacatgtcactggggttgactcttactcgggggcgtaca
gtagatgatttgatgatgtgtggtcctctgtggggacagctttgtggcactcaggacttc
tatccaggaatatgtgcaagattaaatcccctatttcaacctcaacctgccttctctcct
gctctccagacatgtggaggacccatggacattgtgattgttttggatggctccaacagt
atttatccttgggatccaatgaatgcatttctccagaaactaatacctacacttgacatc
gggcccaaaaccacccaggttagcgtcattcaatatggagttgataacaagcttgaattc
aaactgaaccagtatgaaaccaaagatcaagtgcttgttgcagtgtccagaatctcacaa
aagtatggtacttctaccaatacattcggtgcgattagatatgccagtcagttgggtttt
gatccgagtaacggaggccgaccgggcgctgccaaggtgatggttgtcgtcactgatggc
gagtctcatgatgtgtcccttagagatgcagtccttgcagaatgtgagcgaaaaggcatc
acccgctttggtattgctgtgctgggttattacatcagaaccaacaaagacacaagtaac
ctcattgaagaaataaaatccattgccagttcacccatagaaaagtacttcttcaatgtg
tctgaagaagcagctctctccaccattgcaggaactctggggagccgcatcttcaacata
gagggcactggaaaaggaggtgacaacttcaagatggagatgtcccaggtggggttcagc
gctcactactccagcaaacaggatgtgattatgctgggagcagtgggagcttatggttgg
agtgggaccgtcgtccatcaaactgggtcaaaatttgacatttttccttcctctgccttt
gagggaattcttcaagacagaaaccacagctcattactgggttactccgtcagcacgctg
agtgatggatctactgaatactttgtggctggtgcacctcgttccaaccactctggtcaa
gttattgtctacaccatcaacgcccagaagcaagcctctatcatagattcagaaagaggg
aaacagattgggtcatactttggaagcgttctgtgctctctggatgtggacaaagacaga
gtgacggacattctgctggtcggtgcacccatgtttatgagcgagctgaagagagaacaa
ggccgggtctacctcttttctgtcaccaagggtatactgaatgaacagggattcctcaat
ggtccggctccaactgagaatgcacgttttggaatgtccgtttctgccgctcctgacctg
gatcttgatggttacaatgatgttgttgttggcgcaccactagaggagaaagggaaaggc
gtcatctatatctacaatgggagggagaagacaataaacaaagagttctcacagagaata
tttggctccaaacttgatcctcaaataaagtattttggaaggtcccttgatagctacaaa
gatctgaatggtgatacactccctgacatctcagttggtgcctatggtaaagtggtccag
ctctggtcccgtggtgtggcatcagtttcagctacagcttctttcaaccctgataaaatc
aacattttcagcaaaccctgtaacattggcggacgccagctttcatgtttcatcaccaaa
ctctgttttgatgcaacgttcaagcccaagaaccctgttggacccattgatatatcctac
actttgactctggatgctgacttgcagtcctctcgtgttacctcaagaggaatgttcaca
aaaaacaatgaacgcttacttacagaaaatgcaaaaatatcatctacacccctctgtcaa
gaataccaagtttatgttcaggagacgccagattttgtcaattccctcagtctgaaagta
gaaatccagcaacagaatgaaaacgcgaatcctgtcctcgatatttcctctccgagtgcc
tggcagttctttaacccgttcacaaaagactgcggctctgatgacgtgtgcgttagtgat
cttgtgctgagtgtgaagacagacacaaaggcgtccagctcggcacccgttctagtgagt
gacagtaaccgagaactgtcatttcaagtcactgtgaagaacaaaaaggagaacgcctat
aacactcaggtcttggtcacatactccaacaacctctactactcctccgtcattccacct
acggatggagtaaaatgcacttcaactgaagcacaaattgtcacttgccaagtgggatac
ccagcattaaaaacaaacgaagagatgaaatttcagatcaacttcgattacaaccaggag
gtgttgcttaaacaagccaaggtgaaatttgaggctaaaagtgatggtaaggaggagaga
cctgcagacaacactgtggaaatatcgattcctgttcaatatgatgcagggatcagttta
ttgaggcactcaaatattaatttctacgtggcagattctactgctccggtgataacaaca
gtgaaaagtttagatgacatcggcccagagtttaactttacagtcaaggtttcaacaggc
accttccctgtcaacctcctgtacatgaccatagctctgccaatgaaaaccaatggagga
aatcagctcctctatgttaccaaagtggaaacacaagcaggaggttcagtcagctgtgac
tccagcagcctggttgaccagctgaagattggtgtgaagagccaccaagtctccttctct
gaggaaagtttcagaggcatggagaaactggactgcaagaatgcaaaatgtgagtatata
aaatgcatcatcaaagacactgaagcaaagagcgactactatgtgaaagttaagactagg
atctggagtggaacctttattacggctacttatcagactaccgagctgacctgcagtgtt
gatgttgagacctccaaccccgatttgctcatcatcggccacaaacagttgccagtggtg
gtgacagtcagtaaacctggagagaaaggtgacgttccagtgggagtgatcgtcggcagt
gtcatagcaggtctggtgctgttggctctggctgttggactgctgtggaagtttggattc
ttcaaaagaaagtaccagcagcttcagaaagaagatgatgacgacatgcagagccatcct
cacgaaaatgaagtgctgtga
DBGET
integrated database retrieval system