Scomber japonicus (chub mackerel): 128366279
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Entry
128366279 CDS
T09718
Symbol
rbfox1l
Name
(RefSeq) RNA binding protein fox-1 homolog 1-like
KO
K14946
RNA binding protein fox-1
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sjo03041
]
128366279 (rbfox1l)
Spliceosome [BR:
sjo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
128366279 (rbfox1l)
BRITE hierarchy
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
128366279
NCBI-ProteinID:
XP_053182938
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All DBs
Position
10:complement(9468441..9477257)
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AA seq
422 aa
AA seq
DB search
MQQFLDNASETEECSKGYEDNRSLSARLRVGLVYTQAEQNGHSKQDEAPHSHEIWPCCTF
LQGCAEVWGGPTQEAGPGSGDPALPQVYAPPPSYPPPGQGPPTSAGRLPPLDFSSAHASS
EYPEHPQLRVYQGPQHDGAEALPTGNTDEALVPVTSDPQSLSVSVSSGGGAGSGSDEEGS
GKAQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFESAAEADR
AREKLNGTIVEGRKIEVNNATARVVTKKPQTPLVNGEISTSGWKINPVMGAMYAPELYTV
ASFPYPVATPTLAYRGSALRGRGRAVYNTIRSAAATPATMPAYPGVVYQDGLYGAEVYGG
YPAAYRVAQSASAATATYSDGYGRVYATAADPYHHSVGPTTTYGVGTMASLYRGGYNRFT
PY
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagttcttggacaatgcatcagagaccgaggaatgcagtaaagggtatgaagac
aacaggtctttgtctgctagactgagggtggggctggtctacacacaggcggagcagaac
ggccacagcaaacaggatgaagctccgcattcgcatgaaatctggccatgctgcaccttc
cttcagggttgtgcagaggtgtggggaggccccacccaggaggccggccccggcagcggc
gaccctgccctgcctcaggtctacgccccgccgccctcctacccccctccaggtcaaggt
ccgccaacatctgcaggcagactgccacctcttgattttagttctgcccatgccagttca
gagtaccccgaacatccccagctcagggtctatcagggcccccagcacgacggggcagag
gcattgccaaccggcaacacggacgaggcattggtgcctgtgacctctgacccccagtct
ctgagtgtgtcggtgtcgtctggaggcggagctggaagtggaagtgatgaggaagggtca
ggtaaggcccaaccaaaacgcctccatgtctccaacatccccttccgcttcagagaccca
gacctccgacagatgtttgggcaatttggcaagatccttgatgtagaaatcatcttcaat
gaaagggggtcaaagggctttggattcgtcacctttgagagtgcagccgaggctgaccga
gcacgagagaagctgaatggaacaattgtggaagggaggaagattgaggttaataatgcc
actgcaagagtcgtcaccaagaagcctcaaacacctcttgtgaatggtgaaatctcaact
tctggatggaagatcaaccctgtcatgggggcaatgtacgcacctgaactctatacagtt
gccagttttccataccctgtagctactcctactctggcctatcgggggtctgcactgcgc
ggccgaggccgagccgtctacaacaccatccgctctgctgcagccacacctgctactatg
cccgcctaccctggggtggtgtatcaggatggactgtatggagcagaagtttatggcggg
tatcctgcagcttacagagtggctcaatcagcatctgctgctacagcaacctacagcgac
ggttatggacgggtttacgccacagctgcagatccctatcatcactcagttggaccaaca
acaacatatggggttggtacaatggccagtctgtacagaggagggtacaaccgcttcact
ccatactga
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