Scomber japonicus (chub mackerel): 128368632
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Entry
128368632 CDS
T09718
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sjo04121
]
128368632
Ubiquitin system [BR:
sjo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
128368632
BRITE hierarchy
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
SPRY
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
U-box
zf-RING_5
Prok-RING_4
zf-ANAPC11
zf-RING_10
SWT1_3rd
Gp58
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
128368632
NCBI-ProteinID:
XP_053185460
LinkDB
All DBs
Position
12:32964891..32967066
Genome browser
AA seq
561 aa
AA seq
DB search
MAQQGAQLDGAKFCCSICLDLLKDPVTIPCGHSYCMSCINNFWDEEDKKEIYSCPQCRQT
FTPRPVLVKNTMLADIVEELKKTGLQAAAAADLCYAGPEDVACDVCTGRKLKAFKSCLTC
LMSYCENHLQSHFESTKLKKHKLVEPSETLQENICSRHDEVMKMFCRTDQQIICYLCPVD
EHKGHDTVSAAVERTERQRELEVSRLNIQQRIQDREKDVKLLQQEVEAVSRSADKAVEDS
EKIFTQLIHLLQKRSSDVKQQIRSQQETEVSGVKELQEKLQQEITELKRKDAELKQLSHT
EDHNQFLHNYPSVSQLSEPTDSSSINIRPLRYFEDVTAAVSELRDKLQDILKEEWTNISL
TVTEVDVLLSDSKSEPKTRAGFLRYSHEITLDPNTATTQLLLSDGNRKAELTTQRQSYSS
HPDRFSHWHQVLSRESLTGRCYWEVEWSGTGVRVAVAYKNISRTGSSNECQFGRNDQSWA
LYYNKNSYEFWFNNISTPVSGPRSSRVGVYLDHRAGILSFYSVSETMTLLHRVQTTFTQP
LYAGLWLYNNWGDTAELCKVK
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcaaggagctcagctggacggagctaaattctgctgttccatctgtttggat
ctactgaaggatccggtgactattccctgtggacacagctactgcatgagctgtattaac
aacttctgggatgaagaggataagaaggaaatctacagctgtcctcagtgcagacagact
ttcacaccgagacctgtcctggtaaaaaacaccatgttagcagatatagtggaggagctg
aagaagactggactccaagctgctgctgctgctgatctctgctatgctggacctgaagat
gtggcctgtgatgtctgcactgggaggaagctgaaagccttcaagtcctgtttgacgtgt
ctgatgtcttactgtgaaaatcacctccagtctcactttgaatcaaccaaattaaagaaa
cacaagctggtggagccctcggagacgctccaggagaacatctgctctcgtcatgatgag
gtgatgaagatgttctgtcgtactgatcagcagattatctgttatctctgccccgttgat
gaacataaaggtcatgatacagtttccgctgcagtagaaaggactgagaggcagagagag
ctcgaggtgagtcgactaaacatccagcagagaatccaggacagagagaaagatgtgaag
ctgcttcaacaggaggtggaggccgtcagtcgctctgctgataaagcagtggaggacagt
gagaagatcttcactcagctgatccatctcctccagaaaagaagctctgatgtgaagcag
cagatcagatcccagcaggaaactgaagtgagtggagtcaaagagcttcaggagaagctg
cagcaggagatcactgagctgaagaggaaagacgctgaactgaagcagctctcacacaca
gaggatcacaaccagtttctacacaactacccctcagtgtctcaactcagtgaacctaca
gactcatccagcatcaatatccgtcctctgagatactttgaggatgtgacagcagctgtg
tcagagctcagagataaactacaggacatcctgaaggaggaatggacaaacatctcactg
acagtgactgaagtggacgttttactgtcagattcaaaatcagagcccaagaccagagct
ggattcttaagatattcacatgaaatcactttggatccaaatacagcaaccacacagctg
ttattatctgatgggaacagaaaagcagaactaacaactcaacgacagtcttattctagt
catccagacagattctctcattggcatcaggtcctgagtagagagagtctgactggacgt
tgttactgggaggtggagtggagcgggacaggagttcgtgttgcagtcgcatacaagaat
atcagcagaacaggaagctcaaatgaatgtcaatttggacgcaatgaccaatcttgggct
ttatattataacaagaacagttatgaattctggttcaacaacatctcaactcccgtctca
ggtcctcgttcctccagagtcggagtgtacctggatcacagagcaggtattctgtccttc
tacagcgtctctgaaaccatgactctcctccacagagtccagaccacattcactcagcct
ctctatgctggactttggctttataataattggggagacacagctgagttgtgtaaagtg
aaatag
DBGET
integrated database retrieval system
