Scomber japonicus (chub mackerel): 128368639
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Entry
128368639 CDS
T09718
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sjo04121
]
128368639
Ubiquitin system [BR:
sjo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
128368639
BRITE hierarchy
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
SPRY
zf-RING_2
U-box
zf-RING_5
zf-RING_10
zf-RING_6
UvrD-helicase
zf-RING_11
Gp58
WDCP
LMBR1
Motif
Other DBs
NCBI-GeneID:
128368639
NCBI-ProteinID:
XP_053185467
LinkDB
All DBs
Position
12:complement(32272123..32274231)
Genome browser
AA seq
560 aa
AA seq
DB search
MAQQGAQLDQENFSCSICLDLLKDPVAIPCGHSYCMSCIKKHWEREDQRRIYSCPQCRQT
FTPRPVLMKNTMLAALMEQLKKTGLQAAPADLGCAEHEDVACDFCTGRKLKALKSCLQCL
ASYCEKHLQPHYESPTFKKHKLVDPSEKLQENICSRHDEVMKMFCRTDQQSICSLCSVDE
HKGHDTVSAAAERTERQRKLEVSRLNIQQRIQDREKDVKLLQQEVEAVSRSADKAVEDSE
KIFTELIRLLQKRSSDVKQQIRSQQETEMSRVKELQEKLQQEITELKRKDAELKKLSHTE
DHNQFLHNYPSVSQLSEPTDSSSINIHPLRYFEDVTAAVSELRDKLQDILKEEWTNISLA
VTEVDVLLSDTKTEPKTRAGFLKYSREITLDPNTVHTELLLSSEGNRKVKRMSQQQSYFN
HPERFNKYYQVLSRESLTTRCYWEVEWSGRGVGVAVAYKNISRVGGANGCVFGLNDKSVM
LLCDSNTYTFWFNNISTPVSGPVSSRVGVYLDHRAGILSFYSISETMTLLHRVQTTFTQP
LYAGVKLNYVGDTAEFCKLK
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcaaggagctcagctggaccaagaaaacttttcttgttcgatctgtttggat
ctactgaaggatccagtggctattccctgtggacatagctactgtatgagctgtattaaa
aaacactgggaaagagaggatcagaggaggatctatagctgccctcagtgcagacagacc
ttcacaccgaggcctgtcctgatgaaaaacaccatgttagcagctttaatggagcagctg
aagaagactggactccaagctgctcctgctgatcttggctgtgctgaacatgaagatgtg
gcctgtgatttctgtactgggaggaaactgaaagccctaaagtcctgtttgcagtgtctg
gcttcttattgtgagaaacacctacagcctcattatgaatcacctacattcaaaaaacac
aagctggtcgacccctcagagaagctccaggagaacatctgctctcgtcatgatgaggtg
atgaagatgttctgtcgtactgatcagcagagtatctgttctctctgctctgtggatgaa
cataaaggccacgacacagtctcagctgcagcagaaaggactgagaggcagagaaagctc
gaggtgagtcgactaaacatccagcagagaatccaggacagagagaaagatgtgaagctg
cttcaacaggaggtggaggccgtcagtcgctctgctgataaagcagtggaggacagtgag
aagatcttcactgagctgatccgtctcctccagaaaagaagctctgatgtgaagcagcag
atcagatcccagcaggaaactgaaatgagtcgagtcaaagagcttcaggagaagctgcag
caggagatcactgagctgaagaggaaagacgctgaactgaagaagctctcacacacagag
gatcacaaccagtttctacacaactacccctcagtgtcacaactcagtgaacctacagac
tcatccagcatcaacatccatcctctcagatactttgaggatgtgacagcagctgtgtca
gagctcagagataaactacaggacatcctgaaggaggaatggacaaacatctcactggca
gtgactgaagtggatgttttactgtcagatacaaaaacagagcccaagaccagagctgga
ttcttaaaatattcacgtgaaatcactctagatccaaatacggtacacacagagttatta
ttatcatctgaggggaacagaaaagtaaaaagaatgagtcaacaacagtcttattttaat
catccagaaagattcaataaatattatcaggtcctgagtagagagagtctgacaacacgt
tgttactgggaggtggagtggagcgggagaggggttggtgtagcagtcgcatacaagaat
atcagcagagttggaggcgcaaatggatgtgtatttggattaaatgacaaatctgttatg
ttactttgtgacagtaacacttacacattttggttcaacaacatctcaactcccgtctca
ggtcctgtttcctccagagtcggagtgtacctggatcacagagcaggtattctctccttc
tacagcatctctgaaaccatgactctcctccacagagtccagaccacattcactcagcct
ctctatgctggagttaagcttaattatgttggagacacagctgagttttgtaaactcaaa
tag
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integrated database retrieval system
