Scomber japonicus (chub mackerel): 128368663
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Entry
128368663 CDS
T09718
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sjo04121
]
128368663
Ubiquitin system [BR:
sjo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
128368663
BRITE hierarchy
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
SPRY
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
U-box
zf-RING_5
Prok-RING_4
MRP-S31
UvrD-helicase
WDCP
LMBR1
Motif
Other DBs
NCBI-GeneID:
128368663
NCBI-ProteinID:
XP_053185496
LinkDB
All DBs
Position
12:32955028..32956722
Genome browser
AA seq
559 aa
AA seq
DB search
MAQQGAQLDGAKFCCSICLDLLKDPVTIPCGHSYCMSCINNFWDEEDKKEIYSCPQCRQI
FTPRPVLVKNTMLADIVEELKKTGLQATDHCYAGPEDVACDVCTGRKLKAFKSCLVCLAS
YCENHLQPHYDAAPLKKHKLVNPSKKLQENICSRHDEVMKMFCRTDKKCICYLCTMDEHK
GHDTVPAAAERTERQRELEVSRLNIQQRIQDREKDVKLLQQEVEAVSRSADKAVEDSEKI
FTELIRLLQKRSSDVKQQIRSQQETEVNRVKELQEKLQQEITELKRKDAELKQLSHTEDH
NQFLHNYPSVSQLSEPTDSSSINIRPLRYFEDVTAAVSELRDKLQDILKEEWTNISLTVT
EVDVLLSEPKSEPKTRAGFLRYSHEITLDPNTANTRLLLSDGNRKAKLTRQQQSYSSHPD
RFTGWQQVLSRESLTGRCYWEVECSGTGVYVAVAYKNISRAGNSNECVFGYNDKSWALHC
YSNSYEFWSNNIKTPVSGPVSSRVGVYLDHRAGILSFYSVSETMTLLHRVQTTFTQPLYA
GLWFGYNRYGDTAELCKVK
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcaaggagctcagctggacggagctaaattctgctgttccatctgtttggat
ctactgaaggatccggtgactattccctgtggacacagctactgcatgagctgtattaac
aacttctgggatgaagaggataagaaggaaatctacagctgtcctcagtgcagacagatc
ttcacaccgagacctgtcctggtaaaaaacaccatgttagcagatatagtggaggagctg
aagaagactggactccaagctactgatcactgctatgctggacctgaagatgtggcctgt
gatgtctgcactgggaggaagctgaaagccttcaagtcctgtttggtctgtctggcttca
tactgtgagaatcacctccagcctcattatgatgcagctccactgaaaaaacacaagctg
gtcaacccctccaaaaagctccaggagaacatctgctctcgtcatgatgaggtgatgaag
atgttctgccgtacagataagaagtgtatctgttatctatgcactatggatgaacataaa
ggccacgacacagtcccagctgcagcagaaaggactgagaggcagagagagctcgaggtg
agtcgactaaacatccagcagagaatccaggacagagagaaagatgtgaagctgcttcaa
caggaggtggaggccgtcagtcgctctgctgataaagcagtggaggacagtgagaagatc
ttcactgagctgatccgtctcctccagaaaagaagctctgatgtgaagcagcagatcaga
tcccagcaggaaactgaagtgaatcgagtcaaagagcttcaggagaagctgcagcaggag
atcactgagctgaagaggaaagacgctgaactgaagcagctctcacacacagaggatcac
aaccagtttctacacaactacccctcagtgtcacaactcagtgaacctacagactcatcc
agcatcaatatccgtcctctgagatactttgaggatgtgacagcagctgtgtcagagctc
agagataaactacaggacatcctgaaggaggaatggacaaacatctcactgacagtgact
gaagtggacgttttactatcagaaccgaaatcagagcccaagaccagagctggattctta
agatattcacatgaaatcactctggatccaaacacagcaaacacacggctgttattatct
gatgggaacagaaaagcaaaactaacaagacaacaacagtcttattctagtcatccagac
agattcactggatggcagcaggtcctgagtagagagagtctgactggacgttgttactgg
gaggtggagtgcagcgggacaggagtttatgtagcagtcgcatacaagaatatcagcaga
gcaggaaactcaaatgaatgtgtatttggatacaatgacaaatcttgggctttacattgt
tacagtaacagttatgaattctggtccaacaacattaaaactcccgtctcaggtcctgtt
tcctccagagtcggagtgtacctggatcacagagcaggtattctgtccttctacagcgtc
tctgaaaccatgactctcctccacagagtccagaccacattcactcagcctctctatgct
ggactttggtttggttataatcgttatggagacacagctgagttgtgtaaagtgaaatag
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integrated database retrieval system
