Scomber japonicus (chub mackerel): 128368667
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Entry
128368667 CDS
T09718
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sjo04121
]
128368667
Ubiquitin system [BR:
sjo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
128368667
BRITE hierarchy
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
SPRY
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
U-box
zf-RING_5
Taxilin
Prok-RING_4
UvrD-helicase
SseC
Exonuc_VII_L
WDCP
Motif
Other DBs
NCBI-GeneID:
128368667
NCBI-ProteinID:
XP_053185500
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All DBs
Position
12:32949240..32950931
Genome browser
AA seq
558 aa
AA seq
DB search
MAQQGAQLDGAKFCCSICLDLLKDPVTIPCGHSYCMSCINNFWDEEDKKEIYSCPQCRQT
FTPRPVLVKSTMLADLLEELKKTGLQAAAAADLCYAGPEDVACDVCTGRKLKAFKSCLVC
LASYCENHLQPHYDAAPLKKHKLVDPSKKLQENICSRHDEVMKIFCRTDKKCICYLCTMD
EHKGHDTVPAAAEITERQRELEVSRLNIQQRIQDREKDVKLLQQEVEAVSRSADKAVEDS
EKIFTQLIRLLQKRSSDVKQQIRSQQETEVSGVKELQEKLQQEITELKRKDAELKQLSHT
EDHNQFLHNYPSVSQLSEPTDSSSINIRPLRYFEDVTAAVSELRDKLQDILKEEWTNISL
TVTEVDVLLSGPEPKTRAGFCRYSHEITLDPNTAYTELLLSEGNRKVEVTRQHQSYSSHP
DRFTGCHQVLSRESLTGRCYWEVEWSGTAVRVAVAYKNISRTGKSNECTFGFNDKSWALH
YYNKKYEFWFNNIKTIVSGPVSSRVGVYLDHRAGILSFYSVSETMTLLHRVQTTFTQPLY
AGLWFGFYGDSAELCKVK
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcaaggagctcagctggacggagctaaattctgctgttccatctgtttggat
ctactgaaggatccggtgactattccctgtggacacagctactgcatgagctgtattaac
aacttctgggatgaagaggataagaaggaaatctacagctgtcctcagtgcagacagacc
ttcacaccgaggcctgtcctggtaaaaagcaccatgttagcagatttattggaggagctg
aagaagactggactccaagctgctgctgctgctgatctctgctatgctggacctgaagat
gtggcctgtgatgtctgcactgggaggaagctgaaagccttcaagtcctgtctggtgtgt
ctggcttcttactgtgagaatcacctccagcctcattatgatgcagctccattaaagaaa
cacaagctggtcgacccctccaagaagctccaggagaacatctgctctcgtcatgatgag
gtgatgaagatattctgccgtactgataagaagtgtatctgttatctgtgcactatggat
gaacataaaggccatgacacagtcccagctgcagcagaaataactgagaggcagagagag
ctcgaggtgagtcgactaaacatccagcagagaatccaggacagagagaaagatgtgaag
ctgcttcaacaggaggtggaggccgtcagtcgctctgctgataaagcagtggaggacagt
gagaagatcttcactcagctgatccgtctcctccagaaaagaagctctgacgtgaagcag
cagatcagatcccagcaggaaactgaagtgagtggagtcaaagagcttcaggagaagctg
cagcaggagatcactgagctgaagaggaaagacgctgaactgaagcagctctcacacaca
gaggatcacaaccagtttctacacaactatccctcagtgtcacaactcagtgaacctaca
gactcatccagcatcaatatccgtcctctcagatactttgaggatgtgacagcagctgtg
tcagagctcagagataaactacaggacatcctgaaggaggaatggacaaacatctcactg
acagtgactgaagtggacgttttactgtcaggcccagaacccaagaccagagctggattc
tgcagatattcacatgaaatcactctggatccaaacacagcatacacagagctgttatta
tctgaggggaacagaaaagtagaagtaacaagacaacaccagtcttattctagtcatcca
gacagattcactggatgtcatcaggtcctgagtagagagagtctgactggacgttgttac
tgggaggtggagtggagcgggacagcagttcgtgtagcagtcgcatacaagaatatcagc
agaacaggaaaatcaaatgaatgtacatttggattcaatgacaaatcttgggctttacat
tattacaataaaaaatatgaattctggttcaacaacattaaaactatcgtctcaggtcct
gtttcctccagagtcggagtgtacctggatcacagagcaggtattctgtccttctacagc
gtctctgaaaccatgactctcctccacagagtccagaccacattcactcagcctctctat
gctggactttggtttggtttttatggagactcagctgagttgtgtaaagtgaaatag
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