Scomber japonicus (chub mackerel): 128368951
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Entry
128368951 CDS
T09718
Name
(RefSeq) RNA binding protein fox-1 homolog 2-like isoform X1
KO
K14946
RNA binding protein fox-1
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sjo03041
]
128368951
Spliceosome [BR:
sjo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
128368951
BRITE hierarchy
Motif
Pfam:
Fox-1_C
RRM_1
Motif
Other DBs
NCBI-GeneID:
128368951
NCBI-ProteinID:
XP_053185860
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All DBs
Position
2:complement(22825086..22858243)
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AA seq
460 aa
AA seq
DB search
MLMSTDVASIMLPVSRGLMDRDRELDTMAGVHPNAGGAPAAVRGMKRGDPEPDGQTAAAL
VDSAGAECKRPRIDGTGGLGEVGQNNDPLTLGYHGYPSHSQGSQDSAGGQDGLVPPPFSA
FPPPPPPPPQNGLTLDYGGSLYAAGAVQGPVEAGGAANSAANAANSLSAQSDGSSQIDGQ
SGVGSGGGGGGGSVGDDSDAKGTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNE
RGSKGFGFVTFETSADAERAREKLHGTLVEGRKIEVNNATARVMTNKKMTTPYSNGEGLA
ALPYAGWKLSPMVGAMYSPELYTGMTTVPGFPYPAAAAAAASTAATFRGAHLRGRARPVY
STVRAAVPQPAIPTYPGVMAYQDGFYGAADLYGGYAAYRYAQPAAVATPAAAAAAAAAYS
DSYGRVYTADPYHAALAPAAYGVGAMATLYRGGYSRFAPY
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgttaatgtcgaccgacgttgcatccatcatgctgcctgtgtcccggggtctcatggac
cgggatagagagctggacaccatggccggggtgcaccccaacgcgggcggcgctcctgca
gctgtccggggaatgaagcgcggagacccggaacccgacggacagacagcggcggctctg
gtcgactcggccggggctgagtgcaagcgtccccgtatcgacggcacaggagggctcggc
gaggttggtcagaacaacgaccctttgacccttggttaccatggatacccctctcatagt
cagggctctcaggatagtgctggcggccaggacggactcgtacctccacccttctccgcg
ttccctccacctccaccaccgcccccccagaacggcctgaccctggattacgggggtagc
ctgtacgcagccggggccgtccagggccctgtggaagccggcggagcagcaaacagcgcc
gccaacgccgccaacagcctcagtgcacaatcagatgggtcctctcagattgatggtcaa
tcaggggttggctcagggggaggaggaggtggagggagcgtcggggatgattcagatgcc
aaggggacccccaaacgcctccatgtgtccaacatccccttccgcttccgagaccctgac
ctacggcagatgtttgggcaatttggcaaaatcctcgatgtcgagatcattttcaatgaa
aggggatccaagggcttcggttttgtaacatttgagacgagtgcagatgcagagagggcc
agagagaagcttcatggtacactggtggagggacgtaaaatcgaggtcaataatgccaca
gccagagtgatgacgaacaagaagatgaccaccccatactctaacggagaaggccttgca
gctctgccatacgctggatggaagttgagtcccatggttggagcaatgtatagtcctgaa
ctctatacaggtatgacaacagttccagggtttccatacccagcagcagcagcagcggct
gcctccactgctgcaacctttaggggcgctcacctccgaggtcgtgcccggcccgtgtac
agcacagtcagggcagctgtgccacaacctgccatccctacctaccctggtgtaatggcc
tatcaggatggtttttacggtgccgctgatctctatggtggctatgcagcgtatcgttac
gcccagccagctgcggtagcaactcccgcagcagcagcggccgcagcagcagcttacagt
gacagctacggacgagtttatacggcagacccctaccatgctgcactcgccccagctgca
tacggtgttggtgccatggccacgctgtacaggggaggctacagtagatttgccccctac
taa
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