Scomber japonicus (chub mackerel): 128369107
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Entry
128369107 CDS
T09718
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sjo04121
]
128369107
Ubiquitin system [BR:
sjo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
128369107
BRITE hierarchy
Motif
Pfam:
PRY
zf-C3HC4_4
zf-B_box
zf-RING_UBOX
SPRY
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
U-box
zf-RING_6
zf-RING_11
Fib_alpha
CCDC53
Mt_ATP-synt_D
Motif
Other DBs
NCBI-GeneID:
128369107
NCBI-ProteinID:
XP_053186047
LinkDB
All DBs
Position
12:complement(33881556..33883229)
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AA seq
557 aa
AA seq
DB search
MEQKGVLLYRETFTCSICLDLLKDPVTIPCGHSYCMNCIKLHWHGEDRRKICSCPQCKQT
FKRRPVLKKNTMFAALVEQLKKTGPQAAAADHCYAGPEDVACDVCTGRKRKAFKSCLTCL
ASYCENHLQPHYDALALKKHKLVEPSKKLQENICSLHDEVMKMFCRTDQQIICYLCSVNE
HKGHDTVSAAAERTERQRELEVSRLNIQQRIQDSEGDVKLLQQEIQAVSRSADKAVEDTE
KIFNELIRLLQKRSSEVKQQIISQQETEVSRVKEFQEKLQQEITELKRKDAELKQLSHTE
DHNQFLHNYPSMSQLGEPTDSFGIDMRLLRYFEEIKASVSELRDKLHNILKEESADKSLR
VAEVNVLLSETKPKTRVDFLKYSREITLDPNTANTELLLSEGNRKAEVTSRTQSYPSHTD
RFTHWVQMLSKESLLGRCYWEVEWSGEGVDIAVAYKNIKRAGSSKQCRFGFNNKSCCFKC
HRSGYEFWSNGKFSPVSGPVSSRVGVYLDHSAGILSFYSVSEIMTLLHRVQIPFPQPLYA
GLCLYFDGDKAEFFKLR
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggagcagaaaggagttttgctgtacagagagacctttacgtgttcaatctgcctggat
ctactgaaggacccagtgactattccttgtggacacagctactgtatgaactgtattaaa
ttacactggcatggagaagatcggaggaagatctgcagttgccctcagtgcaaacagact
ttcaaacggaggcctgtcttgaagaaaaacaccatgtttgcagctttggtggagcagctg
aagaagactggaccccaagctgctgctgctgatcactgctatgctggacctgaagatgtg
gcctgtgatgtctgcactgggaggaagaggaaagccttcaagtcctgtctgacttgtctg
gcctcttactgtgaaaatcacctccagcctcattatgatgcacttgcattaaagaaacac
aagctggtggagccctccaagaagctccaagagaacatctgttctcttcatgatgaggtg
atgaagatgttctgccgtactgatcagcagataatctgttatctctgctctgtaaatgaa
cataaaggccacgacacagtctcagctgcagcagaaaggactgagaggcagagagagctc
gaggtgagtcgactaaatatccagcagagaatccaggacagtgagggagatgtgaagctg
cttcaacaggagattcaggctgtcagtcgctctgctgataaagcagtggaggacactgag
aagatcttcaatgagctgatccgtctcctccagaaaagaagctctgaagtgaagcagcag
atcatatcccagcaggaaactgaagtgagtcgagtcaaagagtttcaggagaagctgcag
caggagatcactgagctgaagaggaaagacgctgaactgaagcagctctcacacacagag
gatcacaaccagtttttacacaactacccctcaatgtcacaactcggtgaacctacagac
tcattcggcattgatatgcgtcttctgagatactttgaggaaataaaagcatctgtgtca
gagctcagagataaactacacaacatcctgaaggaggaatcggcagacaagtcactgaga
gtggctgaagtgaatgttttactgtcagaaaccaagcccaagaccagagttgacttctta
aaatattcacgtgaaatcactctggatccaaacacagcaaacacagaactgttattatct
gaagggaacagaaaagcagaagtaacaagccgaacacagtcttatcctagtcacacagac
cgattcactcattgggttcagatgctgagcaaagagagtctgcttggacgttgttactgg
gaggtggagtggagcggggaaggagttgatatagcagtcgcatacaagaatatcaagaga
gcaggaagctcaaaacaatgtagatttggatttaataacaaatcttgttgttttaaatgt
cacaggagcggttatgagttttggtcaaacggaaaattttctcccgtctcaggtcctgtt
tcctccagagttggagtatacctggatcacagtgcaggtattctgtccttctacagcgtc
tctgaaatcatgactctcctccacagagtccagatcccattccctcagcctctctatgct
ggactttgtctttattttgatggagacaaagctgagttctttaaactgaggtag
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