Scomber japonicus (chub mackerel): 128369338
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Entry
128369338 CDS
T09718
Name
(RefSeq) transferrin receptor protein 1-like
KO
K06503
transferrin receptor
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04144
Endocytosis
sjo04145
Phagosome
sjo04216
Ferroptosis
sjo04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
128369338
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
128369338
04145 Phagosome
128369338
09143 Cell growth and death
04216 Ferroptosis
128369338
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sjo01002
]
128369338
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sjo04147
]
128369338
04090 CD molecules [BR:
sjo04090
]
128369338
Peptidases and inhibitors [BR:
sjo01002
]
Metallo peptidases
Family M28: aminopeptidase Y family
128369338
Exosome [BR:
sjo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
128369338
Exosomal proteins of colorectal cancer cells
128369338
CD molecules [BR:
sjo04090
]
Proteins
128369338
BRITE hierarchy
Motif
Pfam:
Peptidase_M28
PA
TFR_dimer
DUF4731
Motif
Other DBs
NCBI-GeneID:
128369338
NCBI-ProteinID:
XP_053186332
LinkDB
All DBs
Position
12:complement(11305101..11322116)
Genome browser
AA seq
768 aa
AA seq
DB search
MDQARTTISKIFNGEPHSYTRFNLTQNMEGDNSQVEMKLSSDMDEEVGENGVGDHSQNNS
NRKPYVAQKLGRTPKNLCFMAATILLIFIIGYLIGYLVHRKKEVAPTCAASAVPFEVPPY
HETGAAPLMDWDVVKKLLADKLNARNFESAFSDFSSSSHQAGSPGDEALGKIVHKKFREN
GMNAWTDEHFIKVHDPPASGYNKFTFKSESETRVEGYLSYSATKEVTGAILYAYYGQEND
FRMLKDRNIDLSGRVILVRAGRISFAEKVANAAKMNASAVLIYPDRADYNIGATQLYGHV
HLGSGDPYTPGFPSFNHTQFPPVQSSGLPQIVAQTITEPMATNILKKLGGSSVPQEWGGV
TKLGDETDIITLSVSNELAEKKITNVFGVIKGFVDPDRYVVIGAQRDAWVQGFATSTVGT
SVLVELARSISEMVKNDGFKPRRSIVFASWSAGEYGSVGATEWLEGYLSSLSMKAFSYIS
LDRIVTGRSEFKVASSPLMNSLIKNALDEVKIPSGGATLMSQYGRGNWENTITEPMKLDN
AAYPFLAFSGIPSVSFRFTSGNSEYPYFGTMLDNREKLNAATSNQVPQMAEVAARFAGHI
VLRLVHDHLLRLDLSKYDKIIRTRVAQINAKVKDVQRLKPDLLPKSLTMQWLISASGSYS
RASRSLASDIQNSDLEDIEMCRVLNDRIMTVERNFLSPYVSPRESPFRHILVGSGPHTLQ
GLLNHLEALKSGEVEADLFRNQFALATWTIQGCANSLAGNIWALDNEI
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atggatcaggcaaggacaacaatatcaaaaatttttaatggggagccacactcctacaca
cgtttcaacctgacccagaacatggaaggcgataacagccaggtggagatgaagctgtcg
tctgacatggatgaggaggtcggggaaaatggtgtgggggatcacagtcaaaacaactcc
aatcgcaaaccctacgtggctcagaaacttggacgcacacccaagaacctgtgcttcatg
gcagccactatcctcctcatctttatcatcgggtacttgattggttacctcgtccatcgg
aagaaggaagtggctcccacctgcgcagcctccgcggtcccttttgaagtgcctccgtac
catgaaacaggtgctgccccactcatggactgggatgttgtcaagaaattgcttgctgac
aaattgaatgcacgcaacttcgaaagtgccttcagtgactttagcagtagcagccaccag
gctggttctccaggtgatgaagctcttgggaaaatagtgcacaagaagtttagagagaac
ggcatgaacgcctggaccgatgagcacttcattaaggtgcatgaccccccagcgtccggc
tacaacaaatttactttcaagagcgagagtgagacacgagtagagggatacctgtcttat
agtgccactaaagaagtaacgggtgccatcctgtatgcatactacgggcaggaaaatgac
ttcaggatgctgaaggacaggaacattgacctcagtggcagggtcattctcgtcagagct
ggtaggatcagctttgcagagaaggtagccaatgctgccaaaatgaatgcctctgctgtg
ctgatctacccagaccgcgctgattacaatatcggagccactcagctctatggacatgtc
cacctgggttcaggagatccttacacccccggcttcccctccttcaaccacacacagttt
cctcctgtccagtcttcaggcctgccacaaatcgtggctcagaccatcacagaacccatg
gccaccaacatcctgaagaagctgggaggttcgagtgtgccacaagagtggggaggcgtc
accaaactgggagatgagaccgacatcattactttgagtgtcagcaacgaacttgcagag
aaaaagataactaatgtcttcggggtcatcaaagggtttgtggatccagaccgatatgtg
gttattggtgcccagagggatgcatgggttcaaggttttgctacttcaactgtcggaacc
agtgtccttgttgagctggctcgttccatctcagaaatggtgaaaaatgatggattcaaa
ccacggaggagtattgtgtttgctagctggagtgctggagaatatgggagtgttggcgcc
accgagtggttggagggttatctgtcttctttgagcatgaaagccttctcctacatcagc
ctggatcgtattgtaacaggtcgctctgaatttaaagtggcttccagtcccttgatgaac
agtctgatcaaaaatgctctggatgaggtgaaaatcccaagcggtggtgcaactcttatg
tctcaatatggaagaggcaactgggagaatactataacggagcccatgaagttggacaat
gctgcatatcctttccttgccttttctggcattccgtctgtctcatttagattcacctcc
ggtaattcagaatacccgtactttggcacaatgctggataatcgggaaaagttgaacgct
gccacatccaaccaagttcctcagatggctgaagtggctgcccgatttgcaggtcatatt
gttctgaggctggtccatgaccatctgctgagattggatctttcaaagtatgacaagatt
attcgtactcgtgtggctcagatcaacgcaaaagtcaaggatgttcagaggttgaagcct
gatctgctgcccaagagtctgaccatgcagtggttgatctcagcctctggctcctacagc
cgtgcctctcgcagcctggcatcagacattcagaacagcgacctggaagacatcgagatg
tgccgcgtccttaatgaccgcatcatgacggtggaaaggaacttcctgtcgccatacgtg
tctccgagagagagtcctttccgccacatcctggtcggcagtggcccgcacacactccag
gggctgctcaaccacctcgaagccctcaagagcggcgaagttgaggccgacctgttccgg
aaccagtttgccctggcgacctggaccattcagggctgtgccaactcgttagctgggaac
atctgggctctggataatgaaatctaa
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