Scomber japonicus (chub mackerel): 128369417
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Entry
128369417 CDS
T09718
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sjo04121
]
128369417
Ubiquitin system [BR:
sjo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
128369417
BRITE hierarchy
Motif
Pfam:
PRY
zf-C3HC4_4
zf-B_box
SPRY
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
CEBP_ZZ
UvrD-helicase
U-box
FapA
Motif
Other DBs
NCBI-GeneID:
128369417
NCBI-ProteinID:
XP_053186430
LinkDB
All DBs
Position
12:complement(31371934..31373730)
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AA seq
557 aa
AA seq
DB search
MAHQGSQLDRTKFCCSICLDLLKHPVTIPCGHSSCMICIDNFWDGEDKKEMYSCPQCRQT
FTPRPVLMKNTLLVTLVEQLKKTGLQAAPADHCYAGPEDVACDVCTGRKLKAFKSCLVCL
ASYCKKHLQPHHDVAPLKKHKLVDPLEKLQENICSHHDEVMKMFCRTDQQSICYLCSVEE
HKGHDTVSAAAERTEKHIELEGSRLNIHQRIQDREKDVKLLQQEVEAVSLSADKAVEDSE
KIFTELIYLLQKRSSDVKQQIRSQQETEVSRVKELQEKLQQEITELKRKNAELKQLSRTE
DHTQFLHNYHSVSQLSEPTDSSSINIRPLRYFEDVTAAVSELRDKLQDILREKWTSISLA
VTEVDVLLPPQEPKTRAEFLKYLHEISLDPNTAYTQLLLSEGNRKATFIKEKKSYSSHPD
RFTYWCQALSRESLTGRCYWEVEWGGRQVYAAVAYKNISRAMWWNACKFGHNNNSWALCC
DTNCNKCFFNNISTPVSGPVSSKVGVYLDHRAGILSFYSVSETMTLLHRVQTTFTQPLYA
GVCLYDYGDTAEFCKLK
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggcgcatcaaggatctcagctggacagaacaaaattctgctgttcgatctgtctggat
ctactgaagcatccagtgactattccctgtggacacagcagctgtatgatctgtattgac
aacttctgggatggagaggataagaaggaaatgtacagctgtcctcagtgcagacagaca
ttcacaccgaggcctgtcctgatgaaaaacaccttattagtaactttagtggagcagctg
aagaagactggacttcaagcagctcctgctgatcactgctatgctggacctgaagatgtg
gcctgtgatgtctgcactgggagaaaactcaaagccttcaaatcatgtctggtgtgcctg
gcctcttactgtaagaaacacctccaaccacaccatgatgtggctccattaaagaaacac
aagttggttgaccctttggagaagctccaggagaacatctgctctcatcatgatgaggtg
atgaagatgttctgtcgtactgatcagcagagtatctgttatctctgctctgtagaggaa
cataaaggccacgacacggtctcagctgcagcagaaaggactgagaaacacatagagctc
gaggggagtcgactaaacatccaccagagaatccaggacagagagaaagatgtgaagctg
cttcaacaggaggtggaggccgtcagtctctctgctgataaagcagtggaggacagtgag
aagatcttcactgagctgatctatctcctccagaaaagaagctctgatgtgaagcagcag
atcagatcccagcaggaaactgaagtgagtcgagtcaaagagcttcaggagaagctgcag
caggagatcactgagctgaagaggaaaaatgctgaactgaagcagctatcacgcacagag
gatcacacccagtttctacacaactaccactcagtgtcacaactcagtgaacctacagac
tcatccagcatcaatatccgtcctctgagatactttgaggatgtgacagcagctgtgtcg
gagctcagagataaactacaagacatcctgagggagaaatggacaagcatctcactggca
gtaactgaagtggatgttttactgccaccacaagagcccaaaaccagagctgagttctta
aaatatttgcatgagatcagtctagatccaaacacagcatacacacagctgttattatct
gaggggaacagaaaagcaacattcataaaagaaaaaaagtcttattctagtcacccagat
agatttacttactggtgtcaggccctgagtagagaaagtctgactggacgttgttactgg
gaggtggagtggggagggagacaagtttatgcagcagtcgcatacaagaacatcagtcga
gcaatgtggtggaatgcatgtaaatttggacataataacaattcttgggctttatgttgt
gacactaattgtaacaaatgtttcttcaacaacatatcaactcccgtctcaggtcctgtt
tcctccaaagtaggagtgtacctggatcacagagcaggtattctgtccttctacagcgtc
tctgaaaccatgactctcctccacagagtccagaccacattcactcagcctctctatgct
ggagtttgtctttatgattatggagacacagctgagttctgtaaactcaaatag
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