Scomber japonicus (chub mackerel): 128369743
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Entry
128369743 CDS
T09718
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sjo04121
]
128369743
Ubiquitin system [BR:
sjo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
128369743
BRITE hierarchy
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
SPRY
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
U-box
zf-RING_5
Prok-RING_4
Fes1
Motif
Other DBs
NCBI-GeneID:
128369743
NCBI-ProteinID:
XP_053186795
LinkDB
All DBs
Position
12:30698171..30699859
Genome browser
AA seq
562 aa
AA seq
DB search
MAQQGAQLDGAKFCCSICLDLLKDPVTIPCGHSYCMSCIKNFWDGEDEKKIYSCPQCRQT
FTPRPVLMKSTMFADLLEDLKKTGLQAAAPADLCFAGPEDVACDFCTGRKLKASKSCLNC
LASYCEKHLQPHHDVAPLKKHKLVEPSKKLQENICSRHDEVMKMFCRTDQKCICYLCSVE
EHKGHDTVSAAAERTERQRELEVSRQDIQQRILDREKDVKLLQQEVEVVNRYADKAVEDS
EKIFTELIRLIQERSSDVKQQIRSEQETKVSEVKERQVELQQEITELKKKDAELELLSRT
ENHTQFLRDYAPLSLPVLSSSPCLSLYTELCFDYVEEAVSEAKCTLEDILNKTWSKQSLT
IPEVDVLPSNQEAEPKTRAEFLQYSHQITLDPNTANKHLSLSEGNRAATKTDIVRPYSSH
RDRFKQCWQVLSRESLTGRCYWEVERDGRCAVAVTYKDINFRGTTTTIQSPFGDNDKSWA
LDCCQIMHLFRHNNNLTVIPGPQSSTVGVYLDHKAGILSFYSVSETMTLLHRVQTRFTQP
LYAGLRFYKSVFKSTAEFCKVD
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggcacagcaaggagctcagctcgacggagcaaaattctgctgttcgatctgtttggat
ctactgaaggatccggtaactattccctgtggacacagctactgcatgagctgtataaaa
aacttctgggatggagaggatgagaagaaaatctacagctgccctcagtgcagacagaca
ttcacaccgaggcctgtcctgatgaaaagcaccatgtttgcagatttattggaggacctg
aagaagactggactccaagctgctgctcctgctgatctctgctttgctggacctgaagat
gtggcctgtgatttctgtactgggaggaagctgaaagcatccaagtcctgtctgaactgc
ctggcctcttactgtgagaaacacctccaaccacaccatgatgtagctccattaaagaaa
cataagctggttgagccctccaagaagctccaggagaacatctgctctcgtcatgatgag
gtgatgaagatgttctgtcgtactgatcagaagtgtatctgttatctctgctctgtggaa
gaacataaaggccacgacacagtctctgctgcagcagaaaggactgagaggcagagagag
ctcgaggtgagtcgacaagacatccagcagagaatcctggacagagagaaagatgtgaag
ctgcttcaacaggaggtggaggttgtcaatcgctatgctgataaagcagtggaggacagt
gagaagatcttcactgagctgatccgtctcatccaggaaagaagttctgatgtgaagcag
cagatcagatctgagcaggagaccaaagtgagtgaagtcaaagagcgtcaggtggagctg
cagcaggagatcactgagttgaagaagaaagatgctgaactggagctcctctcaagaaca
gagaatcacacccagtttctacgagattatgcaccactatcactgcctgttttgtctagt
agtccatgtttgtctttgtatactgaactgtgctttgactatgtggaagaggctgtgtca
gaggccaaatgtaccctagaggacattctaaacaagacctggtcaaagcagtctttaaca
atacctgaagtcgatgttttaccatcaaatcaagaagcagaaccgaagaccagagctgaa
ttcttacaatactcacaccagatcacactggatccaaacacagcaaacaaacatctgtca
ctgtcagaggggaacagagcagcaacaaaaacagatatagtacggccgtattcaagtcac
agagacaggttcaaacagtgctggcaggtcctgagtagagagagtctgactggacgctgt
tactgggaggtggagagggatgggagatgtgcagtagctgtgacatacaaagatattaac
tttagaggaaccactactacaattcaaagtccatttggagacaatgacaagtcctgggca
ttagattgctgccaaattatgcatctattcagacataacaacaacttgacagtcatccca
ggtcctcagtcctccacagtaggagtgtacctggatcacaaagcaggtattctgtccttc
tacagtgtctctgaaaccatgactctcctccacagagtccagactagattcactcagcct
ctctatgctggattgcggttttacaaatctgtttttaaatccactgctgagttttgtaaa
gtagattaa
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integrated database retrieval system
