Scomber japonicus (chub mackerel): 128369744
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Entry
128369744 CDS
T09718
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sjo04121
]
128369744
Ubiquitin system [BR:
sjo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
128369744
BRITE hierarchy
Motif
Pfam:
zf-C3HC4_4
PRY
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
SPRY
zf-RING_2
U-box
zf-RING_5
Prok-RING_4
Exonuc_VII_L
MRP-S31
Gp58
Zw10_N
Motif
Other DBs
NCBI-GeneID:
128369744
NCBI-ProteinID:
XP_053186796
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All DBs
Position
12:30700544..30702235
Genome browser
AA seq
563 aa
AA seq
DB search
MAQQGAQLDGAKFCCSICLDLLKDPVTIPCGHSYCMSCIQNFWDGEDEKKMYSCPQCREA
FTPRPVLMKNTMLADLVEDLKKTGLQAAAAAPADLCYAGPEDVACDFCTGRKLKASKSCL
NCLASYCENHLQPHHEVAPLKKHQLVEPSKKLQENICSRHDEVMKMFCRTDQKCICYLCS
VDEHKGHETVSAAAERTERQRELEESQKKIQQRIQDREKDVKLRQQEVKALSRYADKTVK
NSEKIFTELIHLLQKISSDVKQQIRSQQETIASRVEEHQEKLQQEITELKKKDAELEQLS
KTENHTQFLQDYRPLSLPLRLRMPNLNLCSKVNFVDVEEALSEAKSTLLDILNKTWSKWS
LTIPEVDVLASSQEAEPKTRAEFLQYSQQITLDPNTALTHLLLSEGNRKATKMKTEKSYP
YHADRFAYYWQVLSKESLTGRCYFEVERRGRCAVAVTYKDIDFRGTTTTIQSPFGNNDKS
WALDCCQIMHLFRHSDNLTVIPGPVSSRVGVYLDHKAGILSFYSVSETMTLLHRVQTTFT
QPLYAGLRFYDSPFESTAEFCKD
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atggcacagcaaggagctcagctcgacggagcaaaattctgctgttcgatctgtttggat
ctactgaaggatccggtaactattccctgtggacacagctactgcatgagctgtatacaa
aacttctgggatggagaggatgagaaaaaaatgtacagctgccctcagtgcagagaggcc
ttcacaccgaggcctgtcctgatgaaaaacaccatgttagcagatttagtggaggacctg
aagaagactggactccaagctgctgctgctgctcctgctgatctctgctatgctggacct
gaagatgtggcctgtgatttttgtactgggaggaagctgaaagcatccaagtcgtgtctg
aactgcctggcttcttactgtgagaatcacctccaaccacaccatgaggtagctccatta
aagaaacaccagctggttgaaccctccaagaagcttcaggagaacatctgctctcgtcat
gatgaggtgatgaagatgttctgtcgtactgatcagaagtgtatctgttatctctgctct
gtggatgaacataaaggccacgaaacagtctcagctgcagcagaaaggactgagaggcag
agagagcttgaggagagtcaaaagaaaatccagcagagaatccaggacagagagaaagat
gtgaagctccgtcaacaggaggtgaaggccctcagtcgctatgctgataaaacagtgaag
aacagtgagaagatcttcactgagctgatccatctcctccagaaaataagctctgatgtg
aagcagcagatcagatcccagcaggaaactatagcgagtcgagttgaagagcatcaggag
aagctgcagcaggagatcactgagctgaagaagaaagatgctgaactggagcagctctca
aaaacagagaatcacacccagtttttacaagattacagaccactatcactgcctttgcgc
cttagaatgccaaacttaaatttatgttctaaagtaaactttgtggatgtggaagaggct
ctatcagaggccaaatctacactgctggacattctgaacaagacctggtcaaagtggtct
ttaacgatacctgaagtcgatgttttagcatcaagccaagaagcagaaccgaagacaaga
gctgaattcttacaatactcacaacagatcacactggatccaaacacagcactcacgcat
ctgttactgtcagaggggaacagaaaagcaacaaaaatgaaaacagaaaagagttatcct
tatcatgcagacaggtttgcatattactggcaggtcctgagtaaagagagtctgactgga
cgttgttactttgaggtggagaggcgtgggagatgtgcagtagctgtgacatacaaagat
attgactttagaggaaccactactacaattcaaagtccatttggaaacaatgacaagtcg
tgggcattggattgttgccaaattatgcatctattcagacatagtgataacttgacagtc
atcccaggtcctgtttcctccagagttggagtgtacctggatcacaaagcaggtattctg
tccttctacagcgtctctgaaaccatgactctcctccacagagtccagactacattcact
cagcctctctatgctggattgcggttttacgactctccttttgaatccactgctgagttt
tgtaaagattaa
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